Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq2403 107 2e-18
seq4893 105 6e-18
seq88 105 6e-18
seq2035 89.7 5e-13
>seq2403
Length=4098
Score = 107 bits (118), Expect = 2e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| ||||| ||||| || | ||||| ||| || |||||||| || || |||||
Sbjct 2171 TTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGATC 2230
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| ||||| || ||||||||||||||| ||| ||| ||||| | |||
Sbjct 2231 AGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2290
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||||| |||||| |||| ||| | || || || || || || || || ||
Sbjct 2291 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGAAG 2350
Query 127106 ATCTGCA 127112
|||||||
Sbjct 2351 ATCTGCA 2357
>seq4893
Length=312
Score = 105 bits (116), Expect = 6e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957
|| || |||||| || | ||| ||| || || || ||||| |||| | || ||
Sbjct 303 TCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCC 244
Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017
|| || | ||| || || ||| | |||| |||||||| || ||||| |||||||||||
Sbjct 243 GTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTT 184
Query 127018 GTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076
|||| ||| ||| ||||| |||| |||| ||||| | ||||| || || | || |
Sbjct 183 GTCCTGGATCTTCGACTTGACGTTG-TCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAA 125
Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| ||||| || || || ||||| || || |||||
Sbjct 124 TCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq88
Length=36327
Score = 105 bits (116), Expect = 6e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 126923 TCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAG 126982
|| || || ||||||||||| | |||||| ||| || || ||||| || || |
Sbjct 32849 TCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCCTCGAGTTGTTTGCCCGCAAAA 32790
Query 126983 ATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTG 127041
|||| |||||||| || ||||| || |||||||||||| ||| ||| ||| | ||||
Sbjct 32789 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTG 32730
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| |||||| | | ||| || |||| ||| | || || |||||||| || || ||
Sbjct 32729 -TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAGGGTCTTGAC 32671
Query 127102 AAAAATCTGCAT 127113
|| || |||||
Sbjct 32670 GAAGATTTGCAT 32659
Score = 82.4 bits (90), Expect = 7e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| ||||| || ||| || || ||| ||| || | ||| || ||
Sbjct 32627 GTCGACTCCTTTTGGATATTATAGTCGGACAAAGTCCGACCATCTTCCAACTGCTTGCCG 32568
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | |||| |||||||| ||||| || ||||||||||||||| || ||| |||
Sbjct 32567 GCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTA 32508
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091
| | |||| ||| || | ||| || || | ||| | || ||||||||||
Sbjct 32507 ACATTGTCGATGGTATCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCA 32453
>seq2035
Length=5329
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || ||||||||||| | || | ||| || ||||| || ||||| |
Sbjct 1057 CTCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAA 1116
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041
||||| |||||||| || || || ||||||||||||||| ||| || ||||| |
Sbjct 1117 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1176
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| ||||| | ||| || || | ||| | || ||||| || || || || ||
Sbjct 1177 GTCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 1236
Query 127102 AAAAATCTGCATGG 127115
|| ||||||||||
Sbjct 1237 GAAGATCTGCATGG 1250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475464923464640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |