Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq88 95.1 1e-14
seq4893 91.5 1e-13
>seq88
Length=36327
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | || || || ||||| || |||||| |||||||| |||||
Sbjct 32888 ATACCACCGCGCAGGCGCAGGACAAGGTGCAGAGTGCTTTCCTTCTGGATATTGTAATCC 32829
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | |||||| || || | |||| || |||||||| ||
Sbjct 32828 GAAAGAGTGCGACCATCCTCGAGTTGTTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGA 32769
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || || || || || || | || | || | |||||||||||||||
Sbjct 32768 GGAATACCCTCCTTGTCCTGGATCTTCGACTTAA-CGTTGTCGATGGTGTCGGAAGACTC 32710
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || | || || ||||| || || || || || ||||||||
Sbjct 32709 CACCTCGAGGGTGATAGTCTTCCCGGTCAGGGTCTTGACGAAGATTTGCAT 32659
>seq4893
Length=312
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| |||| ||| | |||| ||| ||||| ||||| || || ||||||| ||
Sbjct 305 AGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGC 246
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| ||||| || || || ||| | |||| || ||||||||||| |||||||| ||
Sbjct 245 CCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCC 186
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| || || || || |||| || | || | ||||| || ||| || || || ||
Sbjct 185 TTGTCCTGGATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGT 127
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||| ||||| || || || ||||| || ||||||||
Sbjct 126 AATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451969096358560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |