Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq979 248 1e-60 seq1383 131 2e-25 >seq979 Length=11123 Score = 248 bits (274), Expect = 1e-60 Identities = 1076/1680 (64%), Gaps = 29/1680 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| ||||||||||| || |||||||| | | ||||| || Sbjct 5237 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTG 5178 Query 115618 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | |||| | || | | || | |||| | ||| | ||||| ||||||||||| Sbjct 5177 ATCTTGCCCA-TGCTCGGCTCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAA 5119 Query 115677 -GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 115735 ||| || ||||| || ||||| | || || | ||||||||| || || Sbjct 5118 AGCG-CCACGATCGGCAGCCATCTGAACGACGGTGCGCTGAGAGATTTCCCAAACGGTCT 5060 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 ||||||| ||| ||||| ||||| | ||| || ||||| || ||||| | Sbjct 5059 TGTAGAGAGCCTTGATATCGGTCGGGATGTTAGGGATGTTCTGGATCGAACCACCATCGG 5000 Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 || ||| | | |||||| | | ||||||||||| || | || |||| || || Sbjct 4999 CGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACAAGGTCCTTCAAGA 4940 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 | |||||||| |||||||| || | | || | | | |||||||||| || Sbjct 4939 GCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACG 4880 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| ||||| ||||| || ||||| |||| |||||| | || ||||| || ||||||| Sbjct 4879 TGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGG 4820 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 | || | ||| | |||||| |||| ||| | || | || ||||||| ||||||| Sbjct 4819 GCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCC 4760 Query 116036 AGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095 |||| || | | | | | | |||||| || ||||||||||||| ||||| Sbjct 4759 AGTCCCAGAGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATA 4700 Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155 | || ||||| ||| | ||| |||| ||| | ||| |||| ||| | || Sbjct 4699 CCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGG 4640 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 116215 || || |||||||| || ||||| || || | ||||| | |||||| | Sbjct 4639 TCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAG 4580 Query 116216 AATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 116275 | || || | | || | | || |||| || || || |||||||||| ||| | Sbjct 4579 ACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGA 4520 Query 116276 TTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGA 116335 | ||||| || | ||| || || ||| || || || || || |||| Sbjct 4519 TGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGA 4460 Query 116336 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 116395 | | | | || || || || || | | || ||| || ||||| | | | ||| Sbjct 4459 TGATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCAT 4400 Query 116396 AACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 116455 | | | | | | ||| ||| ||||||||| | || ||||| || || || | Sbjct 4399 AGACACCCTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGG 4340 Query 116456 AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGG 116515 ||| || | | |||||| || || || || |||| || || || |||| Sbjct 4339 CAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGG 4280 Query 116516 TGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCG 116575 |||| | |||||| || || ||| ||| || ||||||||||||||| | || Sbjct 4279 TGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 4220 Query 116576 TCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTG 116634 | || ||||| || || | || ||| || || | ||| | | | | | || | | ||| Sbjct 4219 TGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTG-ATAGT- 4162 Query 116635 GCGTTGG--CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCA 116692 | | | | || || ||| ||||||||| || |||||||| ||||| ||| ||| Sbjct 4161 -CTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCA-CCA 4104 Query 116693 CAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCC 116751 ||| || | || || || || | || || | |||| ||| | || || | Sbjct 4103 TAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTC 4044 Query 116752 TCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGA 116811 || || ||||||||||||||||| || |||||||| ||| ||||||||| ||| || Sbjct 4043 TCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGG 3984 Query 116812 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 116871 |||| || | || || || ||| | || | || || | || || |||||||| Sbjct 3983 ACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAA 3924 Query 116872 GGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATAC 116925 || || ||||| | || | | || | |||| ||| | |||| || || Sbjct 3923 GGCTCGAGGTAGATGGCAAAGGCACC---GGGACGCTTGTTGCCACCTTGGTCAACGTAG 3867 Query 116926 CTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT- 116984 | || || ||| || || || ||||| || ||||| |||| || ||| || || Sbjct 3866 CGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTG 3807 Query 116985 CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTG 117043 || ||| || || | | || | || |||||||| | || || || |||| Sbjct 3806 CCGGCGATGTATGATCC--AGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTG 3749 Query 117044 CCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 117103 || ||| || || ||||| | | |||||| ||||||| || ||||| |||| Sbjct 3748 CCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCAT 3689 Query 117104 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAG 117162 |||| | ||| |||||||| || | || ||||| || ||||| ||||||||| Sbjct 3688 CCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGGCGTTGAAG 3630 Query 117163 AGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC 117221 ||||| || | || || |||| | || | | |||||| | ||| ||||| | ||| Sbjct 3629 AGGGTGGGGGAGGCATGTGTGAAGA-ACTTGTTGGACATGAGGTTGTATGTCTCGATGAC 3571 >seq1383 Length=8527 Score = 131 bits (144), Expect = 2e-25 Identities = 308/458 (67%), Gaps = 18/458 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || ||||| ||||||||||||||||| ||||| || |||| ||| |||||||| Sbjct 7755 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 7696 Query 127291 AAAATCAAATGGGTTCTTTGA--GTTCCAAATT---GTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | || | | || || |||| || | ||| Sbjct 7695 GAAGTCGAAGGGGTTTGTCGACCGGTACACCTTCTCGTTG-----CCGAGGGCGACGAGC 7641 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 || || || | |||| |||||||||||| |||| | |||||||| |||| ||| Sbjct 7640 AGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGG 7581 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 || || || || || || |||| ||| ||| ||| ||| || || | |||| Sbjct 7580 GCGCACGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGGCGTCGACGATGATG 7521 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG-C 127521 | | ||| | | | || | ||| ||| || | ||| || || ||| | Sbjct 7520 TCCTCAATGACCTGCTTGCTGGGGCGGTTGT-TAAGGTGCGAGAACAG---CAGGCAGGC 7465 Query 127522 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 127581 || || |||||||||||||||||| |||||||| || || |||||| ||| || || Sbjct 7464 GAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGG 7405 Query 127582 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 127641 |||||| || |||||||| | |||||| || | ||| | || ||||||||| || Sbjct 7404 CATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACC 7345 Query 127642 CTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||| ||| || ||||| | || |||| |||||||| Sbjct 7344 CTCGACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGG 7307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613460910881760