Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq979 95.1 2e-14
seq353 86.0 1e-11
>seq979
Length=11123
Score = 95.1 bits (104), Expect = 2e-14
Identities = 157/224 (70%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898
|| ||| || ||||| ||||||| | |||||| | | | | || |||||||||||
Sbjct 5280 CTGGTCGACAGTGAATTGAATGGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCC 5221
Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958
||||| || || || ||| ||| | ||||||| | | |||| || | | ||
Sbjct 5220 CGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATGCTCGG 5161
Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017
||| |||||||||||| || |||||| || ||||||||| ||||| ||||| || |
Sbjct 5160 CTCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAA-GCGCCACGATCGGCAG 5102
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|||| | | | ||| ||| || || ||||| || ||||||
Sbjct 5101 CCATCTGAACGACGGTGCGCTGAGAGATTTCCCAAACGGTCTTG 5058
>seq353
Length=20357
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 116106 TACCAAAGATC-TGCAGACATGGGGTTGGGCGTACCCTTTAACGTTGCGAGCTACGCGCT 116164
|||||| | || ||| ||||||||| ||||||| || || ||| | || |||||||||||
Sbjct 5856 TACCAACGCTCGTGC-GACATGGGGCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCT 5914
Query 116165 ACTGACTCATATTATGGCACATTTGGCGGACCTGGAAGTCGGAGAATTGATACACTCTAT 116224
||||| || || |||| || || ||||||| ||| ||| ||| ||
Sbjct 5915 GCTGACGCACATGCTGGCGCACGTGTGCGACCTGGTGCCCGGGTCGCTGACCCACGTCAT 5974
Query 116225 TGGGGACGCGCACATCTACACCAACCATGTGG-CGCAGCTCGAGCTGCAGGTGAAGCGGG 116283
|| ||||||||| | ||| ||||| |||| ||| ||||||| |||| || |||| |
Sbjct 5975 GGGCGACGCGCACGTGTACCTGAACCACGTGGACGC-GCTCGAGACGCAGCTGCAGCGCG 6033
Query 116284 AGATAAGGCC 116293
|| |||||
Sbjct 6034 AGCCGAGGCC 6043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795095205540160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |