Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 306 4e-78
seq4893 140 3e-28
seq2403 125 7e-24
seq88 113 5e-20
seq2035 89.7 5e-13
>seq1383
Length=8527
Score = 306 bits (338), Expect = 4e-78
Identities = 517/738 (70%), Gaps = 17/738 (2%)
Strand=Plus/Minus
Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT--GGTTTCGCAAT 132769
||| |||||||||| | |||||| |||||||| ||||| ||| ||| |||| | | |
Sbjct 7652 AGGGCGACGAGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTT--GGAGT 7595
Query 132770 TAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828
| | || ||||| ||||| ||||| || |||||||| || ||||||||| ||
Sbjct 7594 TCATGCCGAGCAGGGCGCAC-GGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACG 7536
Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888
|||||| || ||| ||| || | | | ||| || || | | ||| ||||
Sbjct 7535 GCGTCGACGATGATGTCCTCAATGACCTGCTTGCTGGGGCGGTTGTTAAGGTGCGAGAAC 7476
Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948
| || ||| || |||||| || | |||||||| | || ||||| |||||| |||
Sbjct 7475 AGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAG 7416
Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008
|||| |||||||||||||||||| || |||||||| || |||| ||| || ||
Sbjct 7415 GTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTG 7356
Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCTTT 133067
||||||| |||||||| || || || || |||||||||| | | || || | |||| |
Sbjct 7355 AAGAAGATACCCTCGACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGGTCGACTTC-TG 7297
Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGAT 133127
| | |||||| ||||| ||||| |||||||| | || | || || || |||||
Sbjct 7296 GTCAGTGATCCACCGCAGGGCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGAT 7237
Query 133128 GGCGTTCAACAAACGGAG-TTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGT 133184
||| || |||| || | | | || ||| | | ||||||||| |||||
Sbjct 7236 GGCATTGAACA---GGTGCGTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 7180
Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244
|| || | || ||||| | ||||||||| ||| || |||||||| ||||| || ||
Sbjct 7179 GGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGC 7120
Query 133245 CTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTC 133304
||| ||||| || || ||| ||||||||||| || |||||||||||||||||
Sbjct 7119 CTCCGGGACCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTC 7060
Query 133305 GCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT---TCAA 133361
|||||||| || || || | ||| |||||| | ||| | ||||| ||
Sbjct 7059 CGACGCGGCGAAGAAAGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGATCTT 7000
Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC 133421
| | ||||||| | ||||||||| ||||| | ||||||| ||||||| || || ||
Sbjct 6999 GTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 6940
Query 133422 CTCGGCTTTTTTGTACAT 133439
|||||| || ||||||||
Sbjct 6939 CTCGGCCTTCTTGTACAT 6922
>seq4893
Length=312
Score = 140 bits (154), Expect = 3e-28
Identities = 163/215 (76%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || ||||| || || || | || || ||| | |
Sbjct 88 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 147
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| ||||| | |||||
Sbjct 148 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 206
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||||| |||| ||||||||| ||| |||| |||| ||| || |||| |||||||||
Sbjct 207 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 266
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456
|||||| ||||| ||| ||| |||| |||||||||
Sbjct 267 CATCCAGAAGGAGAGC-ACGTTGCACTTGGTGCTG 300
>seq2403
Length=4098
Score = 125 bits (138), Expect = 7e-24
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
|||| || ||||| || || |||||||| || ||||||||| |||| |||||| || | |
Sbjct 2357 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGG 2298
Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364
||| | | | | | || || |||| ||||| ||||| |||||| ||||||| |
Sbjct 2297 ACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGC 2238
Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424
|||| || || | |||||||||||||| || || | ||||| ||| ||||||||||
Sbjct 2237 AGCGCCTGATCTTTGCGGGCAAACAGCTCGAGGATGGCCGCACTCTCTCTGACTACAACA 2178
Query 38425 TCCAAAAGG 38433
| || ||||
Sbjct 2177 TTCAGAAGG 2169
>seq88
Length=36327
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || || || || |||||| |||| || ||| | ||
Sbjct 32659 ATGCAAATCTTCGTCAAGACCCTGACCGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 32718
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||| || |||| ||||| ||||| ||||| | |||||
Sbjct 32719 GACACCATCGACAACG-TTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 32777
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||||||||||| || || || | ||||| || || |||||
Sbjct 32778 GCAGCGCCTGATTTTTGCGGGCAAACAACTCGAGGATGGTCGCACTCTTTCGGATTACAA 32837
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| |||||| || ||||| | || |||||
Sbjct 32838 TATCCAGAAGGAAAGCACTCTGCACCTTGTCCTGCG 32873
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || |||||||| || || || || | || || || | |
Sbjct 33115 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATTACTCTGGAAGTGGAATCTTCG 33174
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || ||| || | || || ||||| || ||| | |||||
Sbjct 33175 GATACGATCGACAACG-TCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGACCA 33233
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||| |||| || | || || || |||||||||
Sbjct 33234 GCAGCGTTTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCCGACTACAA 33293
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| || || || |||||||||||| | | |||||||
Sbjct 33294 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTGCGTCTCCGTGGCGGCC 33343
>seq2035
Length=5329
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | |
Sbjct 1248 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 1189
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| ||||| || ||| | |||||
Sbjct 1188 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1129
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || ||||| ||||| || || | | |||||| || |||||
Sbjct 1128 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTCTCGGATTACAAT 1069
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| || || || | ||||| ||
Sbjct 1068 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTCCG 1034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500135061962240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |