Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1383 306 4e-78 seq4893 140 3e-28 seq2403 125 7e-24 seq88 113 5e-20 seq2035 89.7 5e-13 >seq1383 Length=8527 Score = 306 bits (338), Expect = 4e-78 Identities = 517/738 (70%), Gaps = 17/738 (2%) Strand=Plus/Minus Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT--GGTTTCGCAAT 132769 ||| |||||||||| | |||||| |||||||| ||||| ||| ||| |||| | | | Sbjct 7652 AGGGCGACGAGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTT--GGAGT 7595 Query 132770 TAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | || ||||| ||||| ||||| || |||||||| || ||||||||| || Sbjct 7594 TCATGCCGAGCAGGGCGCAC-GGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACG 7536 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 |||||| || ||| ||| || | | | ||| || || | | ||| |||| Sbjct 7535 GCGTCGACGATGATGTCCTCAATGACCTGCTTGCTGGGGCGGTTGTTAAGGTGCGAGAAC 7476 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || ||| || |||||| || | |||||||| | || ||||| |||||| ||| Sbjct 7475 AGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAG 7416 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 |||| |||||||||||||||||| || |||||||| || |||| ||| || || Sbjct 7415 GTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTG 7356 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCTTT 133067 ||||||| |||||||| || || || || |||||||||| | | || || | |||| | Sbjct 7355 AAGAAGATACCCTCGACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGGTCGACTTC-TG 7297 Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGAT 133127 | | |||||| ||||| ||||| |||||||| | || | || || || ||||| Sbjct 7296 GTCAGTGATCCACCGCAGGGCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGAT 7237 Query 133128 GGCGTTCAACAAACGGAG-TTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGT 133184 ||| || |||| || | | | || ||| | | ||||||||| ||||| Sbjct 7236 GGCATTGAACA---GGTGCGTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 7180 Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244 || || | || ||||| | ||||||||| ||| || |||||||| ||||| || || Sbjct 7179 GGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGC 7120 Query 133245 CTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTC 133304 ||| ||||| || || ||| ||||||||||| || ||||||||||||||||| Sbjct 7119 CTCCGGGACCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTC 7060 Query 133305 GCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT---TCAA 133361 |||||||| || || || | ||| |||||| | ||| | ||||| || Sbjct 7059 CGACGCGGCGAAGAAAGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGATCTT 7000 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC 133421 | | ||||||| | ||||||||| ||||| | ||||||| ||||||| || || || Sbjct 6999 GTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 6940 Query 133422 CTCGGCTTTTTTGTACAT 133439 |||||| || |||||||| Sbjct 6939 CTCGGCCTTCTTGTACAT 6922 >seq4893 Length=312 Score = 140 bits (154), Expect = 3e-28 Identities = 163/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || || || ||||| || || || | || || ||| | | Sbjct 88 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 147 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| ||||| | ||||| Sbjct 148 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 206 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||| |||| ||||||||| ||| |||| |||| ||| || |||| ||||||||| Sbjct 207 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 266 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456 |||||| ||||| ||| ||| |||| ||||||||| Sbjct 267 CATCCAGAAGGAGAGC-ACGTTGCACTTGGTGCTG 300 >seq2403 Length=4098 Score = 125 bits (138), Expect = 7e-24 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || || |||||||| || ||||||||| |||| |||||| || | | Sbjct 2357 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGG 2298 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC 38364 ||| | | | | | || || |||| ||||| ||||| |||||| ||||||| | Sbjct 2297 ACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGC 2238 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 |||| || || | |||||||||||||| || || | ||||| ||| |||||||||| Sbjct 2237 AGCGCCTGATCTTTGCGGGCAAACAGCTCGAGGATGGCCGCACTCTCTCTGACTACAACA 2178 Query 38425 TCCAAAAGG 38433 | || |||| Sbjct 2177 TTCAGAAGG 2169 >seq88 Length=36327 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || || |||||| |||| || ||| | || Sbjct 32659 ATGCAAATCTTCGTCAAGACCCTGACCGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 32718 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| || |||| ||||| ||||| ||||| | ||||| Sbjct 32719 GACACCATCGACAACG-TTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 32777 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||||| || || || | ||||| || || ||||| Sbjct 32778 GCAGCGCCTGATTTTTGCGGGCAAACAACTCGAGGATGGTCGCACTCTTTCGGATTACAA 32837 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| || ||||| | || ||||| Sbjct 32838 TATCCAGAAGGAAAGCACTCTGCACCTTGTCCTGCG 32873 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || || || | || || || | | Sbjct 33115 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATTACTCTGGAAGTGGAATCTTCG 33174 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || ||| || | || || ||||| || ||| | ||||| Sbjct 33175 GATACGATCGACAACG-TCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGACCA 33233 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||||||||| ||| |||| || | || || || ||||||||| Sbjct 33234 GCAGCGTTTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCCGACTACAA 33293 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| || || || |||||||||||| | | ||||||| Sbjct 33294 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTGCGTCTCCGTGGCGGCC 33343 >seq2035 Length=5329 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 1248 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 1189 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 1188 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1129 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| ||||| || || | | |||||| || ||||| Sbjct 1128 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTCTCGGATTACAAT 1069 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || | ||||| || Sbjct 1068 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTCCG 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500135061962240