Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq88 89.7 2e-12
>seq88
Length=36327
Score = 89.7 bits (98), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| || || || || || | || ||||| || ||
Sbjct 32887 ATGCAGATTTTCGTGAAGACCCTGACGGGAAAGACCATCACATTGGAGGTTGAGTCGTCA 32946
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||||| | | || || || ||||||||||| || || |||||||| ||
Sbjct 32947 GACACGATTGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCTCCTGACCAG 33006
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | ||||| | || || ||||| || ||||| | |||||| | || || ||
Sbjct 33007 CAGCGCCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGGACTTTGTCCGACTACAAC 33066
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| || || ||||| ||
Sbjct 33067 ATTCAGAAGGAGAGCACCCTCCACTTGGT 33095
Score = 87.8 bits (96), Expect = 7e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || ||||| || || ||||| || || || || || || ||
Sbjct 32659 ATGCAAATCTTCGTCAAGACCCTGACCGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 32718
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || |||| || || || || ||||| || ||||||||||| ||
Sbjct 32719 GACACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 32778
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | ||||| | || |||||||| || ||||| | ||| | ||||||| |||
Sbjct 32779 CAGCGCCTGATTTTTGCGGGCAAACAACTCGAGGATGGTCGCACTCTTTCGGATTACAAT 32838
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 32839 ATCCAGAAGGA 32849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975565605347888
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |