Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq979 185 1e-41 seq1383 125 9e-24 seq1628 96.9 4e-15 >seq979 Length=11123 Score = 185 bits (204), Expect = 1e-41 Identities = 1104/1743 (63%), Gaps = 39/1743 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATA---TTGATTC 111667 ||||||| ||||| ||||||| || || |||| ||| |||||| || | | || Sbjct 3513 CCCACAGCACATGATCATGCGTGTTGCCGTCGGCATC--TGGGGA-GACAACGTGGAGCG 3569 Query 111668 TGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCT 111727 || | ||||||||| || |||||| | |||| || || | || ||||| Sbjct 3570 CGTCATCGAGACATACAACCTCATGTCCAACAAGTTCTTCACACATGCCTCCCCCACCCT 3629 Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 ||||||||| ||||| || |||| | ||| ||| ||||| | | | ||||| Sbjct 3630 CTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCCTGGTCGACATGAAGGA 3689 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || ||| | ||||| |||| || ||| | || ||| || || ||| ||| Sbjct 3690 TGACAGCATCGAGGGCATCTACGACAGTCTTAAGACTTGCGCCATGATTTCCAAGATGGC 3749 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 || || ||||| | ||||||| || | || | || || || || Sbjct 3750 AGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCATACATCGCCGGCAC 3809 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || || |||| || || || ||||| || || || ||| ||| || ||||| Sbjct 3810 CAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCGCTA 3869 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||||| ||| ||||| | || | | || |||| || ||||| || Sbjct 3870 CGTTGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTCGAGCCTTG 3926 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| || || | |||||||| || | ||| ||||| || | ||||| | || Sbjct 3927 GCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG 3986 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 ||| |||||||||||| || ||||||||||| || |||||||||||| | || ||| Sbjct 3987 -TGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGA 4045 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| || | ||| |||| | || || || || ||||| || ||||| | | Sbjct 4046 AGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCTATG 4105 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 |||| ||||| || ||||| || ||||||||| | | | || | | ||| Sbjct 4106 GTGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGACTA 4165 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | | || | | | | ||| | || || ||| || |||| |||||||| || | || Sbjct 4166 T-CAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACCCC 4224 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| || ||| |||| ||||| || || ||||| | || ||| Sbjct 4225 TTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATC 4284 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || |||||||| || || || ||| | || | | | || ||| || || Sbjct 4285 CGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCCGTC 4344 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTG 112497 || ||||| || || | || || || ||| || || | | | |||| | | || Sbjct 4345 TGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGA-CTACA-ACAAGGGTGTCTATG 4402 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 | | | || || |||||||| | || || ||||| |||| | || | Sbjct 4403 ACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGCAACCTGAACAAGATCATCG 4462 Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 | || ||||| || || ||| || || ||| | ||||| || || | Sbjct 4463 ACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAACATGCGCCACCGCCCCATCG 4522 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCC 112676 | |||||||||| || || || |||| ||| | ||| || || ||| || || Sbjct 4523 GCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCGCTTCG-CATGCCTTTCGAGTCT 4581 Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA- 112735 ||| || || | ||| || || || ||||| || |||||||| |||| ||| Sbjct 4582 CCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATCTATCACGCGGCTC-TGAC 4640 Query 112736 -GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 | | || | || |||| ||| | || |||| |||| ||| || || || | Sbjct 4641 CGCCTCGTGC-GATCTGGCCAAGGAGCAAGGCACATACTCGACCTATGAAGGATCCCCGG 4699 Query 112795 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGAC 112853 || || || | || || | || |||| |||| || | || | | | || ||| Sbjct 4700 TATCCCAGGGTATCCTCCAGTACGACATGT-GGAACGTCACGCCGACCGGCCTCTGGGAC 4758 Query 112854 TGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 112913 |||||||| ||||||| ||||||||| | ||| | || ||||| | | | || Sbjct 4759 TGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAGCTTGCTCCTCGCG 4818 Query 112914 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 112973 || ||||| || ||||| || | |||||| |||| || || |||||||| || |||||| Sbjct 4819 CCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATGCTTCGAGCCCTAC 4878 Query 112974 ACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 113033 ||| | |||||||| | | | | | | || || ||||| | |||||||| Sbjct 4879 ACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACCCCTGG 4938 Query 113034 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 113093 ||| || | ||||| || || |||||||||||| | | |||||| | | ||| | Sbjct 4939 CTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCGCATCATC 4998 Query 113094 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTAC 113153 | |||||||| || || || || | || || || || ||| | ||| Sbjct 4999 GCCGATGGTGGTTCGATCCAGAACATCCCTAACATCCCGACCGATATCAAGGCTCTCTAC 5058 Query 113154 CGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGC 113213 || |||||||||||| | ||| || | ||||| || |||||||| ||| Sbjct 5059 AAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGATGGCTGCCGATCGTGG-CGC 5117 Query 113214 -TTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG-GAAAGTCCAACGATGTCCAA 113269 ||||| |||| |||| ||| | || | |||| | || || | ||| ||| Sbjct 5118 TTTCATCGATC--AGTCCCAGTCGCTCAACATTCACATGCGCGAG-CCGAGCATGGGCAA 5174 Query 113270 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 | || | |||||| | | | |||||| |||||||| ||||| ||||| ||||| Sbjct 5175 GATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACGGGCATGTACTACCT 5234 Query 113330 CCG 113332 ||| Sbjct 5235 CCG 5237 >seq1383 Length=8527 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| |||| || |||| ||||| ||| ||||||||||||||| ||| ||| Sbjct 7307 CCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCT 7366 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 | | | || | |||||||||||||| || |||||||| || || ||||||||||| Sbjct 7367 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||| ||||||||||| |||||| Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCAC 7455 >seq1628 Length=7110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 ||| ||||| || || ||||| || ||||||| |||||| || || | ||| || Sbjct 3986 CTTGCCCACCGCGTCGATCTCGTCGATGAAGATGATGCAGGGCGCGTTCTTGCGCGCCGT 4045 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 16173 | ||||| ||||| ||||| |||||||||||| || |||||||| || || | | Sbjct 4046 GGCGAAGAGGTCCCGGACACGGGAGGCGCCCACACCGACGAACATCTCGACGAACTCGGA 4105 Query 16174 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | || | || || | |||||| || | || || || || | || ||| || || Sbjct 4106 ACCGCTG-ACGCTGTA-GAAGGGCACCTGCGACTCGCCAGCCGTCGCCTTGGCAAGGAGC 4163 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| ||||| || || | |||| |||||| || || ||||||||||| Sbjct 4164 GTCTTACCGGTACCGGGGGGGCCGGACAGGATGGCACCGCGAGGGATCTTGGCGCC 4219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620695564985920