Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq979 150 2e-31 seq1628 114 2e-20 seq172 93.3 5e-14 seq1383 84.2 3e-11 >seq979 Length=11123 Score = 150 bits (166), Expect = 2e-31 Identities = 1065/1696 (63%), Gaps = 45/1696 (3%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| | ||| || || ||||| ||||| ||||||||| |||||| || | ||| Sbjct 5246 GCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGC 5187 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTG 109517 || | || ||| | |||| ||| | ||| | ||| | |||||| ||||| Sbjct 5186 ATGCTGGTGATCTTGCCCATGCTCGG-CTCGCGCATGTGAATGTTGAGCGACTGGGACTG 5128 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574 ||||||||| |||||||| || ||||| | ||| | | | || | ||||| Sbjct 5127 ATCGATGAAAGCGCCACGATCGGCAGCCATCTGAACGACGGTGCGCTGAGAG---ATTTC 5071 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCA-TCGGGAATGTCCACGATGTTTTGAATAG 109633 ||| || |||||||| | | ||||||||| |||||| ||| |||||| || || | Sbjct 5070 CCAAACGGTCTTGTAGAGAGCCTTGATATCGGTCGGGA-TGTTAGGGATGTTCTGGATCG 5012 Query 109634 AGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693 | |||||| | | ||| | | |||||| | | |||||||||| || | | || Sbjct 5011 AACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGAC---CCATGTCGA 4955 Query 109694 GATCGT-CAACAAGATGC--TTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 | || | ||||| | |||||| || || |||||||| | || || Sbjct 4954 CAAGGTCCTTCAAGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCT 4895 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||||||||| | ||||||||| ||||| || || |||||||| |||||||| | || | Sbjct 4894 GGTAGATGTTGGACGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCG 4835 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 | || || |||||||| || | ||| | ||||| |||| ||| | | ||| | | Sbjct 4834 AGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGG 4775 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 | | |||||||| || | | || | | | | | |||||| || Sbjct 4774 CCTTGAGCGCGTCCCAGTCCCAGAGGCC------GGTCGGCGTGACGTTCCACATGTCGT 4721 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990 || || | ||||| | | || || || | | || ||| | || | ||| Sbjct 4720 ACTGGAGGATACCCTGGGATACCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCT 4661 Query 109991 CGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCAT 110050 ||||| ||| | || || || ||||| ||||| || ||||| || || || || Sbjct 4660 TGGCCAGATCGCACGAGGCGGTCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTAT 4601 Query 110051 TCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTA 110110 ||| |||| ||| | | ||||| || | | | | || |||| || | Sbjct 4600 TCAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCA 4541 Query 110111 GACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC-GTCG--AGCAGTTT 110167 | ||||| ||||||| || |||||||| || |||||| || || | ||| | Sbjct 4540 GGCCCTGGACACCGACGCCGATGGGGCGGTGGCGCATGTT---GCTGTTGTAAGCCTCCT 4484 Query 110168 CTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTT-CGTG 110226 || ||||| |||| |||||||| | || || || ||| | ||| | | Sbjct 4483 GGACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGGTTGCGAACCAC-GACTTGGGCG 4425 Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGA 110286 | ||| || || || | | | || | | | | | | ||| | | || || Sbjct 4424 ACTTCGTGCAGCTTCTGGAAGTCATAGACACCCTTGTTGTAGTCGACGAACTGAGGAAGG 4365 Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346 || | || || || ||||| || | | |||||| | | ||| || | || || Sbjct 4364 GCCAGCGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCA 4305 Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406 || |||| |||||| || ||| || | ||||||||| || ||| |||||| Sbjct 4304 GTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 4245 Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466 |||||| ||||||||| | ||| | || || || ||||| | || ||| ||||| | | Sbjct 4244 TGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATAC 4185 Query 110467 CATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 || | | ||| || || || || | || | || ||| ||||||||| | Sbjct 4184 CAGAGCTTTTGGGCCTTGATAGTCTTACG--ACCGCGGCCGGCCTTCTCGTACTTCTCAT 4127 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 ||| | |||| || || | || || ||| | ||| || || || ||| || | Sbjct 4126 ACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACA 4067 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 || | ||| | ||| || ||| || | ||||||||| ||||| |||||||| | | Sbjct 4066 TCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGG 4007 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 || ||| || || || ||| | || || | || ||||| || || || | | Sbjct 4006 CCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGA 3947 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761 | || | || || | |||||| || ||||| |||| || | || || ||| Sbjct 3946 ACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGT 3887 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 || | |||| ||| ||||| || ||| |||||||| | |||||| || || || | Sbjct 3886 TGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGC 3827 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 ||| ||| || || || || || || | | ||||| ||| |||||| | Sbjct 3826 CATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGT 3767 Query 110882 GCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCATA 110939 | || || || || ||| ||| ||| | | ||| | ||| | || | | || Sbjct 3766 TGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCGCA-AGTCT-TAAGACTGTCGTA 3709 Query 110940 AATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACG 110999 || || || || || |||| || | | || |||||||| || | ||| | | Sbjct 3708 GATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTG 3649 Query 111000 AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATC 111057 ||| || || || |||||||| || || | ||||| ||| ||| |||| |||||| Sbjct 3648 AGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTGA--AGAACTTGTTGGACATG 3591 Query 111058 TTGTTGTATGTGTCGA 111073 ||||||||| |||| Sbjct 3590 AGGTTGTATGTCTCGA 3575 >seq1628 Length=7110 Score = 114 bits (126), Expect = 2e-20 Identities = 333/505 (66%), Gaps = 17/505 (3%) Strand=Plus/Plus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 |||||| || || || || | ||||| | ||| |||||||| | ||| || |||| Sbjct 3809 ATCGAAGCGGCCGGGTCGCATGAGAGCCTTATCCAGAATATCCGGCCTGTTGGTGCCGGC 3868 Query 11565 AATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || || || | || | || | ||| ||| |||||||| || || |||| |||||| Sbjct 3869 AAGCACCACGA--CCTGCTCCGAGGTGTTGAAGCCGTCCATCTCCGTAAGAATCTGGTTC 3926 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGA-------ACGCTTC 11673 | ||| || ||||| |||||| | | | | | | |||| ||| | Sbjct 3927 AGCGTGGCCTCGCGCTCGTCGTTGCCGCCGCCCTTGAAGCCGCCGCCGTCGGCACGAGAC 3986 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || || || ||||| ||||| |||||||| | ||| || || ||| || ||| Sbjct 3987 TTGCCCACCGCGTCGATCTCGTCGATGAAGATGATGCAGGGCGCGTTCTTGCGCGCCGTG 4046 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || || ||||| || || ||||| ||||||||||| ||||| | | Sbjct 4047 GCGAAGAGGTCCCGGACACGGGAGGCGCCCACACCGACGAACATCTCGACGAACTCGGAA 4106 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || | || ||| | |||||| || | ||||| ||||| | || || ||||| | Sbjct 4107 CCGCTG-ACGCTGTA-GAAGGGCACCTGCGACTCGCCAGCCGTCGCCTTGGCAAGGAGCG 4164 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTC 11911 ||||||| ||||| || | || | || | ||| || || ||||||||||| || | Sbjct 4165 TCTTACCGGTACCGGGGGGGCCGGACAGGATGGCACCGCGAGGGATCTTGGCGCCTAGCC 4224 Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971 | | ||||| ||| || |||||||| || | |||| | || |||||| Sbjct 4225 TCTGGAACCGCTCGGGCGTCCTGAGGAAGCTGACGAACTCCATGATCTCGGTCTTGGCCT 4284 Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996 ||| |||||| | || |||| ||| Sbjct 4285 CGTCCATACCCGCGACGTCGGCGAA 4309 >seq172 Length=27779 Score = 93.3 bits (102), Expect = 5e-14 Identities = 227/337 (67%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 11667 ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACG 11726 |||||| ||||| |||||| | ||| |||||||| | ||| | || ||||| | Sbjct 24263 ACGCTTGCCACCGATAGCGTCCAACTCGTCGATGAAGATGATGGAAGGAGATTTGGC-CT 24205 Query 11727 TGCCTGTTC-GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785 || | || ||| ||||| || |||||||| || || ||||| ||| | ||||| ||| Sbjct 24204 TGGCGGTGGTGAAGAGTTCGCGAACACGCTTGGCGCCGACACCGACGTAGATCTCGTCGA 24145 Query 11786 AGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 | | || | | ||| | | |||||| || || ||| || |||| ||| ||||| Sbjct 24144 ACTC-GCTACCGGACATGTAGAAGAAGGGCACGCCAGCCTCGCCGGCGACGGCACGAGCC 24086 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || ||||||||||| || || || | || |||| | | | || ||| | |||| || Sbjct 24085 AGTAGAGTCTTACCAGTGCCCGGGGGGCCGACGAGCAAGACTCCTTTGGGCAGCTTGCCA 24026 Query 11905 CC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCT 11962 || || | | | ||| || ||| || ||||| || | |||| ||||| | Sbjct 24025 CCGAGGTTGC--TGAATTTCTCGGGATTCCGCAGAAAGTCGACCAATTCCTGGAGTTCGT 23968 Query 11963 CCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 ||||||| |||| || | |||||||| ||| || Sbjct 23967 CCTTGGCCTCGTCGCAGCCGTGAACATCGGAGAAGCG 23931 >seq1383 Length=8527 Score = 84.2 bits (92), Expect = 3e-11 Identities = 194/289 (67%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||||||||| || |||| || || |||||||| || Sbjct 7454 TGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCG 7395 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| ||| || |||||||| ||||| ||| Sbjct 7394 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCA 7335 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 || || |||| || |||| || ||||||||| || ||| || |||| || || Sbjct 7334 GCAAACGCGACCAGGCGCTGGGC-AAAGGTCGACTTCTGGTCAGTGATCCACCGCAGGGC 7276 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT 119743 ||||| |||||| ||| ||||| || | |||||| | ||| || ||| | Sbjct 7275 CCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGATGGCATTGAACAGGTGCGTGCG 7216 Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCA 119792 | ||| ||||| || || | |||||||| |||||||||||| Sbjct 7215 CTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCA 7167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588931561760800