Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq979 150 2e-31
seq1628 114 2e-20
seq172 93.3 5e-14
seq1383 84.2 3e-11
>seq979
Length=11123
Score = 150 bits (166), Expect = 2e-31
Identities = 1065/1696 (63%), Gaps = 45/1696 (3%)
Strand=Plus/Minus
Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458
|||| | ||| || || ||||| ||||| ||||||||| |||||| || | |||
Sbjct 5246 GCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGC 5187
Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTG 109517
|| | || ||| | |||| ||| | ||| | ||| | |||||| |||||
Sbjct 5186 ATGCTGGTGATCTTGCCCATGCTCGG-CTCGCGCATGTGAATGTTGAGCGACTGGGACTG 5128
Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574
||||||||| |||||||| || ||||| | ||| | | | || | |||||
Sbjct 5127 ATCGATGAAAGCGCCACGATCGGCAGCCATCTGAACGACGGTGCGCTGAGAG---ATTTC 5071
Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCA-TCGGGAATGTCCACGATGTTTTGAATAG 109633
||| || |||||||| | | ||||||||| |||||| ||| |||||| || || |
Sbjct 5070 CCAAACGGTCTTGTAGAGAGCCTTGATATCGGTCGGGA-TGTTAGGGATGTTCTGGATCG 5012
Query 109634 AGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693
| |||||| | | ||| | | |||||| | | |||||||||| || | | ||
Sbjct 5011 AACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGAC---CCATGTCGA 4955
Query 109694 GATCGT-CAACAAGATGC--TTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750
| || | ||||| | |||||| || || |||||||| | || ||
Sbjct 4954 CAAGGTCCTTCAAGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCT 4895
Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810
|||||||||| | ||||||||| ||||| || || |||||||| |||||||| | || |
Sbjct 4894 GGTAGATGTTGGACGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCG 4835
Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870
| || || |||||||| || | ||| | ||||| |||| ||| | | ||| | |
Sbjct 4834 AGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGG 4775
Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930
| | |||||||| || | | || | | | | | |||||| ||
Sbjct 4774 CCTTGAGCGCGTCCCAGTCCCAGAGGCC------GGTCGGCGTGACGTTCCACATGTCGT 4721
Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990
|| || | ||||| | | || || || | | || ||| | || | |||
Sbjct 4720 ACTGGAGGATACCCTGGGATACCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCT 4661
Query 109991 CGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCAT 110050
||||| ||| | || || || ||||| ||||| || ||||| || || || ||
Sbjct 4660 TGGCCAGATCGCACGAGGCGGTCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTAT 4601
Query 110051 TCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTA 110110
||| |||| ||| | | ||||| || | | | | || |||| || |
Sbjct 4600 TCAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCA 4541
Query 110111 GACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC-GTCG--AGCAGTTT 110167
| ||||| ||||||| || |||||||| || |||||| || || | ||| |
Sbjct 4540 GGCCCTGGACACCGACGCCGATGGGGCGGTGGCGCATGTT---GCTGTTGTAAGCCTCCT 4484
Query 110168 CTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTT-CGTG 110226
|| ||||| |||| |||||||| | || || || ||| | ||| | |
Sbjct 4483 GGACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGGTTGCGAACCAC-GACTTGGGCG 4425
Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGA 110286
| ||| || || || | | | || | | | | | | ||| | | || ||
Sbjct 4424 ACTTCGTGCAGCTTCTGGAAGTCATAGACACCCTTGTTGTAGTCGACGAACTGAGGAAGG 4365
Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346
|| | || || || ||||| || | | |||||| | | ||| || | || ||
Sbjct 4364 GCCAGCGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCA 4305
Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406
|| |||| |||||| || ||| || | ||||||||| || ||| ||||||
Sbjct 4304 GTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 4245
Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466
|||||| ||||||||| | ||| | || || || ||||| | || ||| ||||| | |
Sbjct 4244 TGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATAC 4185
Query 110467 CATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524
|| | | ||| || || || || | || | || ||| ||||||||| |
Sbjct 4184 CAGAGCTTTTGGGCCTTGATAGTCTTACG--ACCGCGGCCGGCCTTCTCGTACTTCTCAT 4127
Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584
||| | |||| || || | || || ||| | ||| || || || ||| || |
Sbjct 4126 ACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACA 4067
Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644
|| | ||| | ||| || ||| || | ||||||||| ||||| |||||||| | |
Sbjct 4066 TCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGG 4007
Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704
|| ||| || || || ||| | || || | || ||||| || || || | |
Sbjct 4006 CCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGA 3947
Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761
| || | || || | |||||| || ||||| |||| || | || || |||
Sbjct 3946 ACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGT 3887
Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821
|| | |||| ||| ||||| || ||| |||||||| | |||||| || || || |
Sbjct 3886 TGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGC 3827
Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881
||| ||| || || || || || || | | ||||| ||| |||||| |
Sbjct 3826 CATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGT 3767
Query 110882 GCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCATA 110939
| || || || || ||| ||| ||| | | ||| | ||| | || | | ||
Sbjct 3766 TGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCGCA-AGTCT-TAAGACTGTCGTA 3709
Query 110940 AATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACG 110999
|| || || || || |||| || | | || |||||||| || | ||| | |
Sbjct 3708 GATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTG 3649
Query 111000 AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATC 111057
||| || || || |||||||| || || | ||||| ||| ||| |||| ||||||
Sbjct 3648 AGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTGA--AGAACTTGTTGGACATG 3591
Query 111058 TTGTTGTATGTGTCGA 111073
||||||||| ||||
Sbjct 3590 AGGTTGTATGTCTCGA 3575
>seq1628
Length=7110
Score = 114 bits (126), Expect = 2e-20
Identities = 333/505 (66%), Gaps = 17/505 (3%)
Strand=Plus/Plus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
|||||| || || || || | ||||| | ||| |||||||| | ||| || ||||
Sbjct 3809 ATCGAAGCGGCCGGGTCGCATGAGAGCCTTATCCAGAATATCCGGCCTGTTGGTGCCGGC 3868
Query 11565 AATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
|| || || | || | || | ||| ||| |||||||| || || |||| ||||||
Sbjct 3869 AAGCACCACGA--CCTGCTCCGAGGTGTTGAAGCCGTCCATCTCCGTAAGAATCTGGTTC 3926
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGA-------ACGCTTC 11673
| ||| || ||||| |||||| | | | | | | |||| ||| |
Sbjct 3927 AGCGTGGCCTCGCGCTCGTCGTTGCCGCCGCCCTTGAAGCCGCCGCCGTCGGCACGAGAC 3986
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
|| || || ||||| ||||| |||||||| | ||| || || ||| || |||
Sbjct 3987 TTGCCCACCGCGTCGATCTCGTCGATGAAGATGATGCAGGGCGCGTTCTTGCGCGCCGTG 4046
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791
|||| || || || ||||| || || ||||| ||||||||||| ||||| | |
Sbjct 4047 GCGAAGAGGTCCCGGACACGGGAGGCGCCCACACCGACGAACATCTCGACGAACTCGGAA 4106
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| || | || ||| | |||||| || | ||||| ||||| | || || ||||| |
Sbjct 4107 CCGCTG-ACGCTGTA-GAAGGGCACCTGCGACTCGCCAGCCGTCGCCTTGGCAAGGAGCG 4164
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTC 11911
||||||| ||||| || | || | || | ||| || || ||||||||||| || |
Sbjct 4165 TCTTACCGGTACCGGGGGGGCCGGACAGGATGGCACCGCGAGGGATCTTGGCGCCTAGCC 4224
Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971
| | ||||| ||| || |||||||| || | |||| | || ||||||
Sbjct 4225 TCTGGAACCGCTCGGGCGTCCTGAGGAAGCTGACGAACTCCATGATCTCGGTCTTGGCCT 4284
Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996
||| |||||| | || |||| |||
Sbjct 4285 CGTCCATACCCGCGACGTCGGCGAA 4309
>seq172
Length=27779
Score = 93.3 bits (102), Expect = 5e-14
Identities = 227/337 (67%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 11667 ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACG 11726
|||||| ||||| |||||| | ||| |||||||| | ||| | || ||||| |
Sbjct 24263 ACGCTTGCCACCGATAGCGTCCAACTCGTCGATGAAGATGATGGAAGGAGATTTGGC-CT 24205
Query 11727 TGCCTGTTC-GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785
|| | || ||| ||||| || |||||||| || || ||||| ||| | ||||| |||
Sbjct 24204 TGGCGGTGGTGAAGAGTTCGCGAACACGCTTGGCGCCGACACCGACGTAGATCTCGTCGA 24145
Query 11786 AGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844
| | || | | ||| | | |||||| || || ||| || |||| ||| |||||
Sbjct 24144 ACTC-GCTACCGGACATGTAGAAGAAGGGCACGCCAGCCTCGCCGGCGACGGCACGAGCC 24086
Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904
|| ||||||||||| || || || | || |||| | | | || ||| | |||| ||
Sbjct 24085 AGTAGAGTCTTACCAGTGCCCGGGGGGCCGACGAGCAAGACTCCTTTGGGCAGCTTGCCA 24026
Query 11905 CC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCT 11962
|| || | | | ||| || ||| || ||||| || | |||| ||||| |
Sbjct 24025 CCGAGGTTGC--TGAATTTCTCGGGATTCCGCAGAAAGTCGACCAATTCCTGGAGTTCGT 23968
Query 11963 CCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999
||||||| |||| || | |||||||| ||| ||
Sbjct 23967 CCTTGGCCTCGTCGCAGCCGTGAACATCGGAGAAGCG 23931
>seq1383
Length=8527
Score = 84.2 bits (92), Expect = 3e-11
Identities = 194/289 (67%), Gaps = 5/289 (2%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || || ||||||||||| || |||| || || |||||||| ||
Sbjct 7454 TGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCG 7395
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||||| ||| || |||||||| ||||| |||
Sbjct 7394 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCA 7335
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683
|| || |||| || |||| || ||||||||| || ||| || |||| || ||
Sbjct 7334 GCAAACGCGACCAGGCGCTGGGC-AAAGGTCGACTTCTGGTCAGTGATCCACCGCAGGGC 7276
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT 119743
||||| |||||| ||| ||||| || | |||||| | ||| || ||| |
Sbjct 7275 CCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGATGGCATTGAACAGGTGCGTGCG 7216
Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCA 119792
| ||| ||||| || || | |||||||| ||||||||||||
Sbjct 7215 CTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCA 7167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588931561760800
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