Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq979 192 7e-44 seq1383 98.7 1e-15 >seq979 Length=11123 Score = 192 bits (212), Expect = 7e-44 Identities = 1004/1578 (64%), Gaps = 47/1578 (3%) Strand=Plus/Minus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||||||||| || || ||||||| ||||||||| ||||| | | ||| || || Sbjct 5076 GATTTCCCAAACGGTCTTGTAGAGAGCCTTGATATCGGTCGGGATGTTAGGGATGTTCTG 5017 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || ||||| || | || ||| | | |||||| | | |||||| ||||| || | Sbjct 5016 GATCGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTC 4957 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 || || || | ||| |||||||| | ||||| || || | | | | Sbjct 4956 GACAAGGTCCTTCAAGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACG 4897 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990 | | |||||||| | ||||||||| || |||||||| || || |||| |||||| | || Sbjct 4896 CTGGTAGATGTTGGACGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGT 4837 Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050 ||||| || ||||| || || | | | ||||| || | ||| | |||||||| Sbjct 4836 CGAGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTT 4777 Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATT 106109 ||||||| | |||||||| || | | | || | || |||| |||| || | | Sbjct 4776 GGCCTTGAGCGCGTCCCAGTCCCAGAGGCCGGTCGGCGTGACGTTCC-ACATGTCGTACT 4718 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 | || | || ||||| || || || ||| | ||| || | ||||| | | | Sbjct 4717 GGAGGATACCCTGGGATACCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGG 4658 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 ||| || || || ||| | |||||||| ||||| || ||||| | ||||| Sbjct 4657 CCAGATCGCACGAGGCGGTCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCA 4598 Query 106230 TCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGC 106284 ||| || || || || || |||| |||| || ||| |||| || Sbjct 4597 GCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGAAGCGCCAGGAAAG-----CATCGGC 4543 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 || || || ||||| | || || || | ||| ||||| || || || || Sbjct 4542 CAGGCCCTGGACACCGACGCCGATGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTG 4483 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTTGT- 106401 || || || || ||| |||| ||| || || | ||| | ||| | Sbjct 4482 GACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGGTT---GCGAACCACGACTTGGGC 4426 Query 106402 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 106461 || ||| || || || | | ||| | | | | | | ||| ||| ||||| Sbjct 4425 GACTTCGTGCAGCTTCTGGAAGTCATAGACACCCTTGTTGTAGTCGACGAACTGAGGAAG 4366 Query 106462 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 106521 ||| | || |||| ||||| || || ||| || | | |||||| | || || Sbjct 4365 GGCCAGCGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTC 4306 Query 106522 TGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCA 106581 || |||| |||||| || || || || | ||||| ||||| ||||| |||||| Sbjct 4305 AGTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 4246 Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641 |||||||||||||||| |||| | || ||||| ||||| | || ||| || || | Sbjct 4245 GTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATA 4186 Query 106642 CCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTG 106697 ||| | | | | | || | || | || | || || || || ||||||||| Sbjct 4185 CCAGAGCTTTTGGGCCTTG----ATAGTCTTACGACCGCGGCCGGCCTTCTCGTACTTCT 4130 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGA 106756 || ||||| || ||||| ||||| | || |||| || || || || || || Sbjct 4129 CATACAGGGCCTCGAACTCGTCACC-ATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGG 4071 Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816 || | |||| ||| | || || ||| || ||||||||||| ||||| |||||||| Sbjct 4070 CACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAG 4011 Query 106817 AGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 |||| |||||||| | | ||| || | || || | || ||||| || | || Sbjct 4010 AGGGCCAGGAAGAGATCGCGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTACGGAGGTC 3952 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935 |||||||| | || || |||||||| ||||| || |||| || | | || | Sbjct 3951 GAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACC---GGG 3895 Query 106936 ACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989 |||| ||| |||| | || ||||| || ||| ||| || || || ||||| || Sbjct 3894 ACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGG 3835 Query 106990 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049 || || |||| || || || || || || ||| | | || | | Sbjct 3834 GATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCG 3775 Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGA 107107 ||||||| | || || || || ||| ||| || || | ||||| | | | ||||| Sbjct 3774 GTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCGCA-AGT-CTTAAGA 3717 Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167 | | ||||| || | ||| ||| ||||| || ||| ||||||||| ||| | | Sbjct 3716 CTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGC 3657 Query 107168 TGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 107225 || || || || ||||| || ||||||||||| || | || || |||| | || | | Sbjct 3656 TG-GGCCTGAGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGA-ACTTGT 3599 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||| || ||||||||| | ||| || | || || || |||||||| || Sbjct 3598 TGGACATGAGGTTGTATGTCTCGATGACGCGCTCCACGTTGTCTCCCCAGATGCCGACGG 3539 Query 107286 CCACACGCATAAACATGT 107303 | |||||||| | ||||| Sbjct 3538 CAACACGCATGATCATGT 3521 >seq1383 Length=8527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || || || || || || |||||| ||||| |||||||| || Sbjct 7455 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCC 7396 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | || | ||| ||||||||||||||| ||| Sbjct 7395 GCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGC 7336 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 |||||||| | ||||||| ||| |||| Sbjct 7335 AGCAAACGCGACCAGGCGCTGGGCAAAGG 7307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589936285948640