Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq979 192 7e-44
seq1383 98.7 1e-15
>seq979
Length=11123
Score = 192 bits (212), Expect = 7e-44
Identities = 1004/1578 (64%), Gaps = 47/1578 (3%)
Strand=Plus/Minus
Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810
||||||||| || || ||||||| ||||||||| ||||| | | ||| || ||
Sbjct 5076 GATTTCCCAAACGGTCTTGTAGAGAGCCTTGATATCGGTCGGGATGTTAGGGATGTTCTG 5017
Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870
|| ||||| || | || ||| | | |||||| | | |||||| ||||| || |
Sbjct 5016 GATCGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTC 4957
Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930
|| || || | ||| |||||||| | ||||| || || | | | |
Sbjct 4956 GACAAGGTCCTTCAAGAGCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACG 4897
Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990
| | |||||||| | ||||||||| || |||||||| || || |||| |||||| | ||
Sbjct 4896 CTGGTAGATGTTGGACGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGT 4837
Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050
||||| || ||||| || || | | | ||||| || | ||| | ||||||||
Sbjct 4836 CGAGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTT 4777
Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATT 106109
||||||| | |||||||| || | | | || | || |||| |||| || | |
Sbjct 4776 GGCCTTGAGCGCGTCCCAGTCCCAGAGGCCGGTCGGCGTGACGTTCC-ACATGTCGTACT 4718
Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169
| || | || ||||| || || || ||| | ||| || | ||||| | | |
Sbjct 4717 GGAGGATACCCTGGGATACCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGG 4658
Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229
||| || || || ||| | |||||||| ||||| || ||||| | |||||
Sbjct 4657 CCAGATCGCACGAGGCGGTCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCA 4598
Query 106230 TCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGC 106284
||| || || || || || |||| |||| || ||| |||| ||
Sbjct 4597 GCTCACGAGCCTCGGGAGACTCGAAAGGCATGCGAAGCGCCAGGAAAG-----CATCGGC 4543
Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344
|| || || ||||| | || || || | ||| ||||| || || || ||
Sbjct 4542 CAGGCCCTGGACACCGACGCCGATGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTG 4483
Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTTGT- 106401
|| || || || ||| |||| ||| || || | ||| | ||| |
Sbjct 4482 GACCGGGTAGTGGTTGACGTCGATGATCTTGTTCAGGTT---GCGAACCACGACTTGGGC 4426
Query 106402 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 106461
|| ||| || || || | | ||| | | | | | | ||| ||| |||||
Sbjct 4425 GACTTCGTGCAGCTTCTGGAAGTCATAGACACCCTTGTTGTAGTCGACGAACTGAGGAAG 4366
Query 106462 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 106521
||| | || |||| ||||| || || ||| || | | |||||| | || ||
Sbjct 4365 GGCCAGCGAGGCCAGGTTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTC 4306
Query 106522 TGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCA 106581
|| |||| |||||| || || || || | ||||| ||||| ||||| ||||||
Sbjct 4305 AGTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 4246
Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641
|||||||||||||||| |||| | || ||||| ||||| | || ||| || || |
Sbjct 4245 GTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATA 4186
Query 106642 CCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTG 106697
||| | | | | | || | || | || | || || || || |||||||||
Sbjct 4185 CCAGAGCTTTTGGGCCTTG----ATAGTCTTACGACCGCGGCCGGCCTTCTCGTACTTCT 4130
Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGA 106756
|| ||||| || ||||| ||||| | || |||| || || || || || ||
Sbjct 4129 CATACAGGGCCTCGAACTCGTCACC-ATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGG 4071
Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816
|| | |||| ||| | || || ||| || ||||||||||| ||||| ||||||||
Sbjct 4070 CACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAG 4011
Query 106817 AGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875
|||| |||||||| | | ||| || | || || | || ||||| || | ||
Sbjct 4010 AGGGCCAGGAAGAGATCGCGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTACGGAGGTC 3952
Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935
|||||||| | || || |||||||| ||||| || |||| || | | || |
Sbjct 3951 GAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACC---GGG 3895
Query 106936 ACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989
|||| ||| |||| | || ||||| || ||| ||| || || || ||||| ||
Sbjct 3894 ACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGG 3835
Query 106990 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049
|| || |||| || || || || || || ||| | | || | |
Sbjct 3834 GATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCG 3775
Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGA 107107
||||||| | || || || || ||| ||| || || | ||||| | | | |||||
Sbjct 3774 GTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCGCA-AGT-CTTAAGA 3717
Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167
| | ||||| || | ||| ||| ||||| || ||| ||||||||| ||| | |
Sbjct 3716 CTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGC 3657
Query 107168 TGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 107225
|| || || || ||||| || ||||||||||| || | || || |||| | || | |
Sbjct 3656 TG-GGCCTGAGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGA-ACTTGT 3599
Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285
|||||| || ||||||||| | ||| || | || || || |||||||| ||
Sbjct 3598 TGGACATGAGGTTGTATGTCTCGATGACGCGCTCCACGTTGTCTCCCCAGATGCCGACGG 3539
Query 107286 CCACACGCATAAACATGT 107303
| |||||||| | |||||
Sbjct 3538 CAACACGCATGATCATGT 3521
>seq1383
Length=8527
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||||||||| || || || || || || || |||||| ||||| |||||||| ||
Sbjct 7455 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCC 7396
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | | || | ||| ||||||||||||||| |||
Sbjct 7395 GCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGC 7336
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|||||||| | ||||||| ||| ||||
Sbjct 7335 AGCAAACGCGACCAGGCGCTGGGCAAAGG 7307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589936285948640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |