Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq88 87.8 1e-11
>seq88
Length=36327
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|| || || ||||| || || || ||||| || ||||||||||| | ||||| |
Sbjct 32876 AGGCGCAGGACAAGGTGCAGAGTGCTTTCCTTCTGGATATTGTAATCCGAAAGAGTGCGA 32817
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||| || |||||||| || |||||||| || | ||||| ||||||||||| || ||
Sbjct 32816 CCATCCTCGAGTTGTTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCC 32757
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
|| || || || || || || || || || || | || | || ||||| ||
Sbjct 32756 TTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTC-GGAAGACTCCACCTCGAGGGT 32698
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||| || || || || || || ||||| |||||||||
Sbjct 32697 GATAGTCTTCCCGGTCAGGGTCTTGACGAAGATTTGCATA 32658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028976789097640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |