Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq88 100 2e-16
seq2035 95.1 1e-14
>seq88
Length=36327
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || ||| || || || || ||||| |||| | ||| | |||| |||
Sbjct 33323 ACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGACCATCCTCC 33264
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
|| ||||| || || || ||||||||||| || || || || || || || ||||| |||
Sbjct 33263 AACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGA 33204
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| ||| || || | || | || || || | ||||||||| ||||| | ||| ||
Sbjct 33203 ATCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCACTTCCAGAGTAATCGTCTTC 33144
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| || | || || || || |||||||||
Sbjct 33143 CCCGTGAGGGTCTTGACGAAGATCTGCATG 33114
>seq2035
Length=5329
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338
|| || || ||||||||||| | || || ||| |||| || | ||||| || |||||
Sbjct 1058 TCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 1117
Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398
|||| ||||| || || || || ||||| || || || || || || || ||| |
Sbjct 1118 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1177
Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458
|| | ||||| || ||||| ||||| |||| || ||||| || | || || ||
Sbjct 1178 TCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACG 1237
Query 101459 AATATCTGCATGGTT 101473
|| ||||||||||||
Sbjct 1238 AAGATCTGCATGGTT 1252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396249248274852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |