Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq27 86.0 8e-12
>seq27
Length=52641
Score = 86.0 bits (94), Expect = 8e-12
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 197437 CCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCC 197496
||||| | ||| | || |||||| |||||||||||||||| ||| | | ||||| ||
Sbjct 5650 CCGTTTAGGTAGAGCAGGTCAAAGGCAAAGACGCACACCTTGACCTTAACATCTTCCACC 5709
Query 197497 TTGACATCTTTACGTTTTCTG-GTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTC 197555
|||||||| || | | ||| | ||| |||| || ||||| |||| || |||| ||
Sbjct 5710 TTGACATCCTT-CTTCTTCCGTGTCATGAGCTGCTGGAAGGGCAGGACCTTTTTCTCCTG 5768
Query 197556 AACGTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGA 197615
|| ||||| || || | || ||||||| ||| ||| |||| |||| | |
Sbjct 5769 GACATCCCACGCCACAGATTCGCAATCCAAGACAAAACTCTTGGTGTCCTCCTTGACCCA 5828
Query 197616 TTGGGGAAGCCTATTGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTT 197669
||||||| | || | ||||||||| |||| || || ||| |||||
Sbjct 5829 GGTGGGAAGCTTGGCGAGAACGTCGGGGTATTTCTTGGACAGATCTTCCGAGTT 5882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676678540751680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |