Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq979 383 3e-101 seq1383 212 1e-49 >seq979 Length=11123 Score = 383 bits (424), Expect = 3e-101 Identities = 1218/1861 (65%), Gaps = 88/1861 (5%) Strand=Plus/Minus Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCG 212630 || ||||||| |||||| || ||||||||||| ||||| || || ||| ||||||| Sbjct 5252 GCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTT---CCAGCCG 5196 Query 212631 TGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCG--TGGCCC 212687 | |||||| |||| ||| |||| | ||| |||| | || | Sbjct 5195 GTGAAGTGCAT-GCTGGTGA---TCTT--------------GCCCATGCTCGGCTCGCGC 5154 Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 | || | ||| || ||||| ||| || ||||| | | | | || || ||||| | Sbjct 5153 ATGTGAATGTTGAGCGACTGGGACTGATCGATGAAAGCGCCACGATCGGCAGCCATCTGA 5094 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 | || | ||| |||| ||||| ||||||||| ||| | |||| || ||| Sbjct 5093 ACGACGGTGCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTGATATCGGTCGGG 5034 Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG------CATG 212861 | | ||||||||||| | || || | || | | | || | ||| |||| Sbjct 5033 ATGTTAGGGATGTTCTGGATCGAACCACC----ATCGGC-GATG-ATGCGGTTCTTCATG 4980 Query 212862 TCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGG 212921 | ||| |||||| ||| || | ||| ||| | || |||||||| | |||| Sbjct 4979 TTGTCGGACCAGAGACCCATGTCGACAAGGTCCTTCAAGAGCCAGGGGTTGACAACCTGG 4920 Query 212922 AAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCG 212981 || ||||| | | || | | |||||| | ||| || ||||||||||||| || ||| Sbjct 4919 AACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCATTCG 4860 Query 212982 TTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTC 213041 ||||| ||||| || || | || ||| || |||||||| || | || | |||||| Sbjct 4859 TTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGTTC 4800 Query 213042 CTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGG 213101 | || || ||||| ||| | | ||| | |||||||||| || | || Sbjct 4799 CGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCA-----GAGGCCGG 4745 Query 213102 TCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || || | |||||||||||||| |||| | ||| || | | || ||| || Sbjct 4744 TCGGCG----TGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCGGGGATCCT 4689 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | || | ||||| | ||| |||||||||||||| ||||| || || ||| || ||| Sbjct 4688 TCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCAGAGCCGCG 4629 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGC 213281 | |||||||| || || || | | | || |||| ||||| || ||| ||| ||| Sbjct 4628 TGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACTCGAAAGGC 4569 Query 213282 ATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340 || | ||| |||| |||| ||||| |||||||| |||| ||||||||| | ||| Sbjct 4568 AT-GCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGGGGCGGTG 4510 Query 213341 TCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400 | || ||| ||| | ||||| | ||||| |||| ||||||||||||||| Sbjct 4509 GCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGATGATCTTGTT 4450 Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCC 213460 |||||||| | |||| || ||| | | ||| | | | ||| | ||| | Sbjct 4449 CAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTC------TGGAAGTCATAGAC 4396 Query 213461 CCC------GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCAC 213514 || || | || |||| ||| ||||| | |||||||||||| ||||| || Sbjct 4395 ACCCTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGGCAAC 4336 Query 213515 CTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCC 213574 ||| | | | | |||||| |||||||| |||||||||||| || ||||||||||| Sbjct 4335 CTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCC 4276 Query 213575 CAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACC 213633 ||||||| ||| ||| ||||| | |||| |||||||||||||||| ||||| | Sbjct 4275 GAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGC 4217 Query 213634 CGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCTTGACCACCCG 213691 ||||||| ||| | | | || | |||| |||||| | |||||||| | | Sbjct 4216 CGGTCTCGGTCTGAGCCTCGAGGA--TGGCATACCAGAGCTTTTGGGCCTTGA-TAGTCT 4160 Query 213692 CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA 213751 ||| || | ||| | |||||||| || || || | | ||| |||| || | Sbjct 4159 TACGACCGCGGCCGGCCT--TCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATA 4102 Query 213752 GACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTC 213810 | | | || || || || ||| ||||| || |||| || ||| || |||| Sbjct 4101 GCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTC 4042 Query 213811 TGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCC 213870 ||| | || |||||| ||||| || | ||| || || ||| || || | | | Sbjct 4041 -GACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGA 3983 Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930 || ||| || ||| || || || || || || ||||||| ||| |||||||| | Sbjct 3982 CTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAG 3923 Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGG 213987 |||| | ||||||||||||||| || | || | ||||| || ||||| || | || Sbjct 3922 GCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGG 3863 Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCG 214047 | ||||||||| || || | ||| | | || ||||| |||||||| || | Sbjct 3862 CGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGG 3803 Query 214048 CTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACT 214107 | || || || || | || | | | | ||| ||| || ||||| || || || Sbjct 3802 CGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCATCT 3743 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 |||| ||||||||||| | | | | | || |||||| | ||||||||||| | | Sbjct 3742 TGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTTCA 3683 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTG 214226 || | || |||||| || |||| ||||||| | | || | |||||| || ||| Sbjct 3682 TGTCGACCAGGAAGCAAGAGGAAAGCT-GGGCCTGAGGGGTACCGGCGTTGAAGAGGGTG 3624 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 ||| |||||| | | |||||||| || | ||| |||| ||||| | ||| Sbjct 3623 GGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCTCGATGACGCGCTCC 3564 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCA--CCTCATCAGCATGTGCTG-GGGC-CTC-T 214341 | || || | | || || ||| | ||| | ||||||||| |||| ||| Sbjct 3563 ACGT--TGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCTGTGGGCGCTCGA 3506 Query 214342 CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGT 214401 | || || ||| | ||| || ||||| ||||||||||| |||||||| ||||||| Sbjct 3505 CAATCTTGCCGTTGAG---CTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAAGT 3449 Query 214402 A 214402 | Sbjct 3448 A 3448 >seq1383 Length=8527 Score = 212 bits (234), Expect = 1e-49 Identities = 493/733 (67%), Gaps = 19/733 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 7758 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 7699 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||| | | |||||| | || ||| | | |||| Sbjct 7698 CATGAAGTCGAAGGGGTTTGTCGACCGGTACACCT-TCTCGTTGCCGAGGGCGACGAGCA 7640 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||| ||||| | ||| ||| || ||||||||| | |||| Sbjct 7639 GGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGG 7580 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| || |||| ||||| ||||||| ||| || ||||||| || | | || Sbjct 7579 CGCACGG-CAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGGCGTCGACGATGATG 7521 Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || || | || ||| || | ||||| |||||| | | |||| |||| Sbjct 7520 TCCTCAATGACCTGCTTGCTGGGGCGGTTGTTA---AGGTGCGAGA---ACAGCAGGCAG 7467 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||| | || ||||| || ||||||| ||||||||||| || || Sbjct 7466 GCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCG 7407 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | || || | || ||||||||| Sbjct 7406 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATA 7347 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || |||||| || | || | || | | |||| ||| | |||| Sbjct 7346 CCCTCGACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGGTCGACTTCTGGTCAGTGATC 7287 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || |||||||| |||||||| |||| || || || || ||||| ||| Sbjct 7286 CACCGCAGGGCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGATGGCATTGAAC 7227 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATC 48430 || | | ||| || | | ||| | ||||| | ||||||| | ||| || Sbjct 7226 AGGTGCGTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG---GGAGTAGGTC 7170 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 |||||||| | ||||| || ||||||||| ||||||||| | ||||| ||| Sbjct 7169 TCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCCGGGACC 7110 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || | ||| | ||| | ||| ||||| ||||| || || || || || || Sbjct 7109 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGACGCGGCG 7050 Query 48551 AAGAAGGCAAGGA 48563 ||||| || |||| Sbjct 7049 AAGAAAGCGAGGA 7037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931462515850240