Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq979 277 3e-69
seq1383 251 1e-61
>seq979
Length=11123
Score = 277 bits (306), Expect = 3e-69
Identities = 843/1282 (66%), Gaps = 53/1282 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
||||| || ||||| ||||||||||| ||||| ||| || || ||| | ||||||||
Sbjct 4640 GTCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAG-CTCACGAGCCTCGGG 4582
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| ||| ||||| || ||| | | || | |||||||| ||||| || |||| ||
Sbjct 4581 AGACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCC 4522
Query 221536 GATGGGCCTGTGTCTC------CTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTT 221589
|||||| | ||| | | |||||| |||| || |||| |||| || |||
Sbjct 4521 GATGGGGCGGTGGCGCATGTTGCTGTTGTAAGC-----CTCCTGGACCGGG-TAGTGGTT 4468
Query 221590 GACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTG 221649
||||||||| | ||||| ||||| || | ||||| | || ||| |||||||||
Sbjct 4467 GACGTCGATGATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTG 4408
Query 221650 G---TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC 221706
| | || || |||| || | | |||| || || | | |||||
Sbjct 4407 GAAGTCATAGA-CACC--CTTGTTGTAGTCGACGA--------ACTGAGGA----AGGGC 4363
Query 221707 AACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCT 221764
| ||||||||| || ||||| |||||||| | || | |||| ||||||||
Sbjct 4362 CAGCGAGGCCAGGTTGCAGACGGCAACCTCGTCG--GGTGCCGAGTACTCGATGATCTCA 4305
Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824
|| || |||||| || |||||| || |||| || || || |||||| ||| ||
Sbjct 4304 GTGCACAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTG-CA 4246
Query 221825 GCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883
| | |||||||||||||| ||||| ||| ||||| ||||||| | || || |
Sbjct 4245 GTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATA 4186
Query 221884 CCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGT 221943
|||||| | | ||| | | ||| | ||| || || || ||| || |||
Sbjct 4185 CCAGAGCTTTTGGGCCTTGATAGTCTTAC-GACCGCGGCC--GGCCTTCTCGTACTTCTC 4129
Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003
||| || || |||| ||||| || ||| | ||||| || ||| | ||| ||
Sbjct 4128 ATACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCA 4069
Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063
||||||| |||| | ||| | | ||| | || |||||||||||| || ||||| ||
Sbjct 4068 CATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAG 4009
Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123
||| | |||||||| | | || |||||| ||||| ||| || | || || |
Sbjct 4008 GGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAG 3949
Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183
|||||||| | ||| |||||||| ||||| || |||| ||| | || ||||| |||||
Sbjct 3948 GAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTT 3889
Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAG 222243
||||||||| || || || | | |||||||| || || | || | |
Sbjct 3888 GTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGAT 3829
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TG 222301
|| ||||| ||||||||||| ||||| | || || | || | | ||
Sbjct 3828 GCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCAC---GGATGCGGTG 3772
Query 222302 GCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
| | | |||||| || || || || || ||||||||||| |||| ||| ||||
Sbjct 3771 GATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTC 3712
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||||||||| || ||| ||||| | || | ||| || ||||| || | ||| |
Sbjct 3711 GTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGC 3652
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
| | || || |||||| || || ||||| ||| ||||| ||| | | |||||
Sbjct 3651 CTGAGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACAT 3592
Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATC 222539
|| | ||| ||||| | ||| | | | |||||| ||| || | | | ||| |
Sbjct 3591 GAGGTTGTATGTCTCGATGACGCGCTCCACGTTGTCTCCCCAGATGCCG-ACGGCAACAC 3533
Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597
|||| ||||| ||| || | ||| ||| || | ||||| || ||||| ||
Sbjct 3532 GCATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGTTGAGCT--TCAGGAGGTATGA 3475
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657
||||| |||||||| |||||||| | | || ||||| | | | | || | |||
Sbjct 3474 GCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGC 3415
Query 222658 GGCGTCCAGCTCCGACTTGTGC 222679
| ||| |||||| |||||||
Sbjct 3414 CGAGTCGAGCTCCTCCTTGTGC 3393
>seq1383
Length=8527
Score = 251 bits (278), Expect = 1e-61
Identities = 568/853 (67%), Gaps = 16/853 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || |||||||||||| |||||||| ||
Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972
Query 25537 GCCAAGGACATGGACGGCTGGTACG-CTCTATCCA--AAGACGAGCAGCATTTTCTCAAG 25593
|||||||| | ||| |||| || | ||| | | || ||| || | || ||
Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGTACTTCATCTCT 7032
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || || || || || || || |||||||| ||| |||| |
Sbjct 7033 CACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 7092
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | |||||| || |||||||| |||||||| ||
Sbjct 7093 TTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 7152
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773
|| || | ||||||||| || || ||| | || ||||| | || |||
Sbjct 7153 GAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCTGCC 7212
Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833
|| | | ||||| ||||||||| ||| ||| |||| | ||||||
Sbjct 7213 CAGCGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGCCGAC 7272
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
|||||| || |||||||| ||||| | || |||| | |||| ||||| || |||
Sbjct 7273 TGGGCCCTGCGGTGGATCACTGACCAGAAGTCGACCTTTGCCCAGCGCCTGGTCGCGTTT 7332
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
|||||||| ||||| ||||| ||||||||| | ||||| ||||||||||||||||| ||
Sbjct 7333 GCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAG 7392
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
|| ||||||||| ||| ||| ||||||||||||||| | ||||||||||||
Sbjct 7393 CGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTC 7452
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCTTCTCAAG 26071
|||| || || ||||||||||| | | || ||| || |||| || ||||
Sbjct 7453 CACACCGACTTCGCCTGCCTGCTGTTCTCG---CAC---CTTAACAACCGCCCCAGCAAG 7506
Query 26072 -AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130
|| | | | |||||| || || ||| |||||| ||||||| |
Sbjct 7507 CAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCACCGAG 7566
Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190
| ||||||||| || || |||| || ||||||||||
Sbjct 7567 GCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTC 7626
Query 26191 GTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248
|| ||||||| ||||| || ||| || || || | | ||| | || | ||||
Sbjct 7627 GTCGCCGACCGCCTGCTCGTCGCC--CTCGGCAACGAGAAGGTGTACCGGTCGACAAACC 7684
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| |||||||| ||||| ||||| || | | || |||||||||||||| || ||| | |
Sbjct 7685 CCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCG 7744
Query 26309 TCGGCGACTATCA 26321
||||||| || ||
Sbjct 7745 TCGGCGAGTACCA 7757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928774718659840
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