Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq979 201 1e-46
seq1383 98.7 1e-15
>seq979
Length=11123
Score = 201 bits (222), Expect = 1e-46
Identities = 1042/1637 (64%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||||||| ||||| ||||||| || || |||||||| || || || | || ||
Sbjct 3513 CCCACAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGAGACAACGTGGAGCGCGT 3572
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||||||| || |||||| | | || | |||| || || | || |||||||
Sbjct 3573 CATCGAGACATACAACCTCATGTCCAACAAGT-TCTTCACACATGCCTCCCCCACCCTCT 3631
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||| || ||||| || || || ||| | ||| ||||||||| ||| || |||||
Sbjct 3632 TCAACGCCGGTACCCCTCAGGCC-CAGCTTTCCTCTTGCTTCCTGGTCGACATGAAGGAT 3690
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGG 75446
||| ||| | || ||||| | | ||||| | | | ||||| | || || ||| ||
Sbjct 3691 GACAGCATCGAGGGCATCTACGACAGTCTTAAG-ACT-TGCGCCATGATTTCCAAGATGG 3748
Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506
| || || || || | ||||||| | | || | | ||| || || |
Sbjct 3749 CAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCATACATCGCCGGCA 3808
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
| || || || |||| || || || ||||| || || || ||| ||| || ||||
Sbjct 3809 CCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCGCT 3868
Query 75567 ATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620
| || | |||| || ||||| | || || | || ||||| | || || |
Sbjct 3869 ACGTTGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTCGAGCCTT 3925
Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680
|||| ||||| || | |||||||| || | || ||||| || | || || | ||
Sbjct 3926 GGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAG-TC 3984
Query 75681 GGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
||| | | |||||||| |||| |||||||| ||||| ||||||||||| || |||
Sbjct 3985 CGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAG 4044
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGT 75798
|| || | ||| |||| | || || || || || || || |||| || |
Sbjct 4045 AAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCTAT 4104
Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858
|| ||| ||||| || ||||| || ||||| || ||| || | | | |||
Sbjct 4105 GG-TGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGAC 4163
Query 75859 TGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
| | | || | | | | | ||| | || || ||| | | ||||| ||||| || | |
Sbjct 4164 TAT-CAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACC 4222
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || ||| ||||| ||||| ||||| | || || |
Sbjct 4223 CCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCA 4282
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | |||||| | | || ||| || |
Sbjct 4283 TCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCCG 4342
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097
| ||||| |||| || | |||||||| ||| ||| | | | | | | ||
Sbjct 4343 TCTGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGACTACAACAAGGGTGTCTATG 4402
Query 76098 ATTATGAAAAACTTCATGAAATCACA-AAGA--TTGTTACCAAAAATCTAAACCGAGTCA 76154
| | | || || || ||| || | ||| | ||| ||| || ||| |||
Sbjct 4403 ACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGCAAC---CTGAACAAGATCA 4459
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || || || || || ||||| ||| | || |
Sbjct 4460 TCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAACATGCGCCACCGCCCCA 4519
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----T 76269
| || | ||||| || || || || |||| ||| || |||| ||||| |
Sbjct 4520 TCGGCGTCGGTGTCCAGGGCCTGGCCGATGC-----TTTCCTGGCGCTTCGCATGCCTTT 4574
Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329
|| || || || ||| ||||| | ||||| || ||||| |||||||| |
Sbjct 4575 CGAGTCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATCTATCACGCGGC 4634
Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
||| || || || |||| | | ||||| | || ||| | ||| || ||
Sbjct 4635 TCTGACCGCCTCGTGCGATCTGGCCAAGGAGCAAGGCACATACTCGACCTATGAAGGATC 4694
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAACT 76448
|| | ||||| || | || |||| || |||||| || || | || | | | ||
Sbjct 4695 CCCGGTATCCCAGGGTATCCTCCAGTACGACATGTGG-AACGTCACGCCGACCGGCCTCT 4753
Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508
|||||||| | ||||||| ||||||||| | ||| | || ||||| | |
Sbjct 4754 GGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAGCTTGCTCC 4813
Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568
| || || ||||| || ||||| || | |||||| |||| || || |||||||| || |
Sbjct 4814 TCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATGCTTCGAGC 4873
Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628
| ||||| | |||||||||| | | | | | || |||||||| ||||||||
Sbjct 4874 CCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACC 4933
Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688
||| | || ||||| | || |||||||||||| | | |||||| | | ||
Sbjct 4934 CCTGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCGCA 4993
Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATC 76748
| | | |||||||| || || || ||| | | ||||| ||||||||| ||
Sbjct 4994 TCATCGCCGATGGTGGTTCGATCCAGAACATCCCTAACATCCCGACCGATATCAAGGCTC 5053
Query 76749 TCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTG 76808
||||| || || ||||||||| | ||| || | ||||| || |||||||
Sbjct 5054 TCTACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGATGGCTGCCGATCGTG 5113
Query 76809 GTCGC-TTCATTGATCA 76824
| ||| ||||| |||||
Sbjct 5114 G-CGCTTTCATCGATCA 5129
>seq1383
Length=8527
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| ||| ||||||| | |||||||| ||| ||||||||||||||| ||| | |
Sbjct 7307 CCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCT 7366
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
| | | || | ||| | |||||||| || |||||||| ||||| |||||| || |
Sbjct 7367 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217
| || || || || || ||||||||||||
Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCAC 7455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596524588823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |