Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq979 201 1e-46 seq1383 98.7 1e-15 >seq979 Length=11123 Score = 201 bits (222), Expect = 1e-46 Identities = 1042/1637 (64%), Gaps = 43/1637 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| || || |||||||| || || || | || || Sbjct 3513 CCCACAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGAGACAACGTGGAGCGCGT 3572 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||||||| || |||||| | | || | |||| || || | || ||||||| Sbjct 3573 CATCGAGACATACAACCTCATGTCCAACAAGT-TCTTCACACATGCCTCCCCCACCCTCT 3631 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||| || ||||| || || || ||| | ||| ||||||||| ||| || ||||| Sbjct 3632 TCAACGCCGGTACCCCTCAGGCC-CAGCTTTCCTCTTGCTTCCTGGTCGACATGAAGGAT 3690 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTGGG 75446 ||| ||| | || ||||| | | ||||| | | | ||||| | || || ||| || Sbjct 3691 GACAGCATCGAGGGCATCTACGACAGTCTTAAG-ACT-TGCGCCATGATTTCCAAGATGG 3748 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506 | || || || || | ||||||| | | || | | ||| || || | Sbjct 3749 CAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCATACATCGCCGGCA 3808 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || || || |||| || || || ||||| || || || ||| ||| || |||| Sbjct 3809 CCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCGCT 3868 Query 75567 ATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCAT 75620 | || | |||| || ||||| | || || | || ||||| | || || | Sbjct 3869 ACGTTGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTCGAGCCTT 3925 Query 75621 GGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTC 75680 |||| ||||| || | |||||||| || | || ||||| || | || || | || Sbjct 3926 GGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAG-TC 3984 Query 75681 GGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 ||| | | |||||||| |||| |||||||| ||||| ||||||||||| || ||| Sbjct 3985 CGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAG 4044 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGT 75798 || || | ||| |||| | || || || || || || || |||| || | Sbjct 4045 AAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCTAT 4104 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 || ||| ||||| || ||||| || ||||| || ||| || | | | ||| Sbjct 4105 GG-TGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGAC 4163 Query 75859 TGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 | | | || | | | | | ||| | || || ||| | | ||||| ||||| || | | Sbjct 4164 TAT-CAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACC 4222 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | ||||| ||||||||| || ||| ||||| ||||| ||||| | || || | Sbjct 4223 CCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCA 4282 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 || ||||| || || ||||| || || | |||||| | | || ||| || | Sbjct 4283 TCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCCG 4342 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097 | ||||| |||| || | |||||||| ||| ||| | | | | | | || Sbjct 4343 TCTGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGACTACAACAAGGGTGTCTATG 4402 Query 76098 ATTATGAAAAACTTCATGAAATCACA-AAGA--TTGTTACCAAAAATCTAAACCGAGTCA 76154 | | | || || || ||| || | ||| | ||| ||| || ||| ||| Sbjct 4403 ACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGCAAC---CTGAACAAGATCA 4459 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | ||| || || || || || || || || ||||| ||| | || | Sbjct 4460 TCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAACATGCGCCACCGCCCCA 4519 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----T 76269 | || | ||||| || || || || |||| ||| || |||| ||||| | Sbjct 4520 TCGGCGTCGGTGTCCAGGGCCTGGCCGATGC-----TTTCCTGGCGCTTCGCATGCCTTT 4574 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || || || || ||| ||||| | ||||| || ||||| |||||||| | Sbjct 4575 CGAGTCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATCTATCACGCGGC 4634 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||| || || || |||| | | ||||| | || ||| | ||| || || Sbjct 4635 TCTGACCGCCTCGTGCGATCTGGCCAAGGAGCAAGGCACATACTCGACCTATGAAGGATC 4694 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAACT 76448 || | ||||| || | || |||| || |||||| || || | || | | | || Sbjct 4695 CCCGGTATCCCAGGGTATCCTCCAGTACGACATGTGG-AACGTCACGCCGACCGGCCTCT 4753 Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 |||||||| | ||||||| ||||||||| | ||| | || ||||| | | Sbjct 4754 GGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAGCTTGCTCC 4813 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 | || || ||||| || ||||| || | |||||| |||| || || |||||||| || | Sbjct 4814 TCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATGCTTCGAGC 4873 Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 | ||||| | |||||||||| | | | | | || |||||||| |||||||| Sbjct 4874 CCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACC 4933 Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688 ||| | || ||||| | || |||||||||||| | | |||||| | | || Sbjct 4934 CCTGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCGCA 4993 Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATC 76748 | | | |||||||| || || || ||| | | ||||| ||||||||| || Sbjct 4994 TCATCGCCGATGGTGGTTCGATCCAGAACATCCCTAACATCCCGACCGATATCAAGGCTC 5053 Query 76749 TCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTG 76808 ||||| || || ||||||||| | ||| || | ||||| || ||||||| Sbjct 5054 TCTACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGATGGCTGCCGATCGTG 5113 Query 76809 GTCGC-TTCATTGATCA 76824 | ||| ||||| ||||| Sbjct 5114 G-CGCTTTCATCGATCA 5129 >seq1383 Length=8527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||| ||||||| | |||||||| ||| ||||||||||||||| ||| | | Sbjct 7307 CCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCT 7366 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | | || | ||| | |||||||| || |||||||| ||||| |||||| || | Sbjct 7367 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || || || || |||||||||||| Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCAC 7455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596524588823680