Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq88 91.5 3e-13 >seq88 Length=36327 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || |||||||| || || | | ||| || | ||| || ||||||||||| | | Sbjct 33069 AATGTTGTAGTCGGACAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCG 33010 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| || |||||||| || || || |||||||| || || | || | ||| ||| || Sbjct 33009 CTGCTGGTCAGGAGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGT 32950 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || || |||||||| || | || || || || || || || || || || || || || Sbjct 32949 GTCTGACGACTCAACCTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTG 32890 Query 193358 CAT 193360 ||| Sbjct 32889 CAT 32887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899586521075520