Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq88 91.5 3e-13
>seq88
Length=36327
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || |||||||| || || | | ||| || | ||| || ||||||||||| | |
Sbjct 33069 AATGTTGTAGTCGGACAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCG 33010
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| || |||||||| || || || |||||||| || || | || | ||| ||| ||
Sbjct 33009 CTGCTGGTCAGGAGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGT 32950
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| || |||||||| || | || || || || || || || || || || || || ||
Sbjct 32949 GTCTGACGACTCAACCTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTG 32890
Query 193358 CAT 193360
|||
Sbjct 32889 CAT 32887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899586521075520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |