Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq748 113 1e-19
seq1557 93.3 1e-13
>seq748
Length=13504
Score = 113 bits (124), Expect = 1e-19
Identities = 200/287 (70%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||||| | ||||||||| || ||||| || | ||| || ||||| ||||| || |
Sbjct 10231 CTTGACAAGACGACGCTGGATGTAACCTGTCTCGGCTGTCTTGACAGCGGTATCGATCAA 10172
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAA 302701
||| | ||||| |||| || |||||||| | |||| || ||| | || | | |
Sbjct 10171 ACCTTCGCGACCGGCCATGGCGTGGAAGAAGAACTCTGAAGG-CGTCAAGCCACGGAGAT 10113
Query 302702 AGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761
| ||| | || ||||| || || |||||||| || | ||| |||||| || || ||||
Sbjct 10112 ATGAGTTTTCGACGAAGCCTCGGGCCTCGGGAGAGTAGTCATCCTTGGTGAAATGGGGCA 10053
Query 302762 GGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGC 302821
|||| | || || | ||| | || ||||||||||| || || |||||||||| |
Sbjct 10052 GGGTTCGGTACTTGAACCCGAACGGAATACGCTTTCCTTCGACAATCTGCTGTCCGACCA 9993
Query 302822 ACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAG 302866
| | |||| ||||| || || ||| | | |||||||| ||||
Sbjct 9992 AGGCCGTCATTTGCGAGATGTT--AATGGCGGAACCCTTGGAACCAG 9948
Score = 86.0 bits (94), Expect = 2e-11
Identities = 111/153 (73%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | |||||||||||| |||| ||||| |||||||| ||||| ||
Sbjct 11025 AGAATTTCCTTGAGACGGGGAACACCCAGGGTGACGTT---CTTGGACGACACACCGGCG 10969
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | || || | ||||| ||||| || || || | |
Sbjct 10968 AAATGGAAGGTGTTCAGTGTCATCTGCGTCGCCGGCTCTCCAATGGACTGAGCAGCCAAC 10909
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGAC 301965
| |||||||||||| || || | || || |||
Sbjct 10908 ACACCAACCATTTCACCGGGGGAGACCATGGAC 10876
>seq1557
Length=7509
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 251430 ATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACC 251489
||| |||| | | ||||| || | ||| | || || |||| ||||| | || ||
Sbjct 3804 ATGCACGCGGAACGCATCCGACACTTCAAACAGGCGCTCCTTCAAGAAGCTGGCCGCGCC 3745
Query 251490 GTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCT 251549
||| | |||||| |||||||| ||||||||||||||||| ||||||||||| | || |
Sbjct 3744 GTGCGCAATCATGCAATCACGTTCCATTTCACCGAAACGCAGACCACCATCCCTTGCACG 3685
Query 251550 ACCCTCGGCAGGCTGACGAGT 251570
|||||| | ||||| || ||
Sbjct 3684 ACCCTCCACCGGCTGGCGCGT 3664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471703775146132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |