Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1588 125 6e-24 >seq1588 Length=7360 Score = 125 bits (138), Expect = 6e-24 Identities = 218/317 (69%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | || |||||| |||||| || || ||| Sbjct 2059 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACGAACTTGGAGATGAACCCGTCCAGC 2118 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 || ||||| | ||| || ||||||| |||||||| ||| | || |||| | Sbjct 2119 AGCTCCTGGAGCTTGTTGGCCTCGTGGGCGCCGTTGATGATCCAGCGGTCGTCGGCGGGG 2178 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || ||||| |||||| | || |||||||| || |||| | |||| Sbjct 2179 TCAAGGTTGGTCTGGGCGCCAAGCTCGAAGCCAAAGTACTTGATCAGGTAGGAGCCCGGG 2238 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | || | || ||||| || || |||||| | || |||||||| ||||||||| Sbjct 2239 CGGGCCAGGGACTGGGCGACGCTGGTCAGGTTGACAACAACGGTCTTGATTCCGTTGCCC 2298 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||||| ||||| || ||| ||| |||||||| ||||| | ||| ||| Sbjct 2299 TTGCCTTCGATCTTGGTCTGGAGACGCTCCATCTTGTAGCGATAGAAAGGGTCGCTGACA 2358 Query 34618 TTGCGGTTAACGTTCAC 34634 | |||| ||||| || Sbjct 2359 TCGCGGCGGACGTTGAC 2375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412811229823748