Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 183 5e-40
seq979 159 5e-33
seq293 127 3e-23
seq1557 123 4e-22
seq748 114 2e-19
seq1698 111 2e-18
seq2787 107 3e-17
seq471 107 3e-17
seq69 100 5e-15
>seq1383
Length=8527
Score = 183 bits (202), Expect = 5e-40
Identities = 244/334 (73%), Gaps = 15/334 (4%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||| | |||||| ||| |||||||||||||||||||||||
Sbjct 7449 ACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCGCGCTT 7390
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| |||||||| || ||
Sbjct 7389 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACAGCAGC 7333
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT--TTGTTGATCCACTTCATC 794514
||| |||| || |||| |||||| || | | ||| | |||||||| ||
Sbjct 7332 AAACGCGACCAGGCGCTGGGCAAAGGTC-----GACTTCTGGTCAGTGATCCACCGCAGG 7278
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573
||||| || ||||| || | | | ||| | ||||||||||| || ||||| ||
Sbjct 7277 GCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGATGGCATTGAACAGGTGCGTG 7218
Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633
| || | | || ||||||| ||||||||| ||||| || ||||||||||| ||||||||
Sbjct 7217 CG-CTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCAGAGTGGAT 7159
Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
||| || || |||||||||||| || ||||||
Sbjct 7158 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 7125
Score = 168 bits (186), Expect = 1e-35
Identities = 192/253 (76%), Gaps = 6/253 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||| ||||| |||||||| |||||| |||||| |||||||||||||| |||
Sbjct 7771 TGACGCCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGA 7712
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||| | || | |||| ||||||| ||||
Sbjct 7711 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTCGACCGGTACACCTTCTCGTTGCCGA 7652
Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| ||||| |||||||||||||||||||| ||||||||||| ||| ||| || |||
Sbjct 7651 GGGCGACG--AGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTT 7594
Query 794069 CATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127
|||||||| || || ||| ||||| | |||| ||| ||||| | |||||| ||||
Sbjct 7593 CATGCCGAGCAGGGCGCAC-GGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGG 7535
Query 794128 CCTCGATGATGAT 794140
| |||| ||||||
Sbjct 7534 CGTCGACGATGAT 7522
>seq979
Length=11123
Score = 159 bits (176), Expect = 5e-33
Identities = 336/501 (67%), Gaps = 15/501 (3%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| || ||||| || |||| ||| ||||| ||||||||||| | | ||| |||||
Sbjct 3878 TGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAA 3819
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|||||||||||| || | ||| | || | || || | ||| | | ||||
Sbjct 3818 GTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCG 3759
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|||||||| ||| |||||| || | ||||| | || || | |||||||||||||||
Sbjct 3758 ATGCCGCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCG 3699
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||| |||||||||| | ||| ||||| || || || | | | || |||
Sbjct 3698 ATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTGAGGGGTACCG 3639
Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGTG 2073840
|| |||||||| ||||| | || ||| | ||| | ||||||| | ||| ||
Sbjct 3638 GCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTC 3579
Query 2073841 GCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGACG 2073900
||| |||||| ||| ||| ||| || || ||||| ||| ||
Sbjct 3578 TCGATGACGCGCTCCA---CGT------TGTC------TCCCCAGATGCCGACGGCAACA 3534
Query 2073901 CGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGAC 2073960
||||||||||||| ||| || |||||||| | | || | ||| ||||| ||
Sbjct 3533 CGCATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAG 3474
Query 2073961 CGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGCG 2074020
|| ||||||| | |||||||||| |||| | ||| || || | | |||||
Sbjct 3473 CGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGCC 3414
Query 2074021 GCGTCGAGGGCCTCCTTGTGC 2074041
| |||||| |||||||||||
Sbjct 3413 GAGTCGAGCTCCTCCTTGTGC 3393
Score = 123 bits (136), Expect = 4e-22
Identities = 294/445 (66%), Gaps = 12/445 (3%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||| ||||||||||||| | || ||||||| ||||||| ||||||
Sbjct 4318 ACTCGATGATCTCAGTGCACAGGTTGGAG--CTGCGGATGGTGCCGAGGTTCTTCTGGTT 4261
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| | ||||| | ||||||| |||||| |||| || |||||| |||| ||
Sbjct 4260 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGC 4201
Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCA--CCGAGGTCCTCGCGCGGCCCT 2071747
| || |||||| |||| | ||| | || | | | | | || || ||||| |
Sbjct 4200 CTCGAGGATGGCATACCAGAGCTTTTGGGCCTTGATAGTCTTACGACCGCGGCCGGCCTT 4141
Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807
| ||||| || || || | || | ||| ||| |||||||
Sbjct 4140 CTCGTACTTCTCAT----ACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGG 4085
Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867
| |||| ||||| | || | ||| || ||| || | || || ||| || |
Sbjct 4084 GGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGA 4025
Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927
||||| |||| ||| | ||||||||||| || ||| ||||||||||||||||
Sbjct 4024 GGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGT 3965
Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987
|||| |||||||| | || | || |||||||||||| ||||| |||||| |||||
Sbjct 3964 TCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAA 3905
Query 2071988 AGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|||| || |||||| ||| ||
Sbjct 3904 AGGCACCGGGACGCTTGTTGCCACC 3880
>seq293
Length=22244
Score = 127 bits (140), Expect = 3e-23
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||||| || ||||| ||||||||| |||| |||||| | || ||||||||||||||||||
Sbjct 12088 GCCGCAAATTACCTTGACATCAAGGCCCTTCTCGATGTTGGCTGCAAGACCGTGGCCAAC 12147
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||||||||| ||||| ||||| || || || ||||||| | |||
Sbjct 12148 ATGATCAAGGGCAAGTCGCCAGAGGAGATCCGGAAAACGTTCAACATCACGAACG 12202
>seq1557
Length=7509
Score = 123 bits (136), Expect = 4e-22
Identities = 309/461 (67%), Gaps = 26/461 (6%)
Strand=Plus/Plus
Query 653648 CCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG---CAG 653703
|||| || | || ||||| | |||| |||||||| |||||||| ||| | || ||
Sbjct 3240 CCCGCAGATCGGTGACAAGTTTGCGTCCCGCCACGGTCAAAAGGGTACCATCGGTGTCA- 3298
Query 653704 CGTGCGCTCGACCG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCG 653762
| | | || | | |||| ||||||| || | ||| | |||| |||||||||||||
Sbjct 3299 CATAC---CGGCAGGAGGACATGCCGT--TCACGGCG-GAGGGCATCACGCCCGACATCA 3352
Query 653763 TCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCC 653822
||||||||||||||||||| |||||||| |||||||| | | | |||| ||| ||||
Sbjct 3353 TCATCAACCCGCACGCCATTCCGTCGCGTATGACCATCGCCCATTTGATCGAGTGTCTCC 3412
Query 653823 TGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTTTGGCGGCGTCA 653882
|| ||||||| || || | ||||| | |||||||| ||||| || || ||| |
Sbjct 3413 TGTCCAAGGTGTCCACCCTCAAGGGCATGGAGGGCGACGCGACCCCCTTCACCGACGTGA 3472
Query 653883 CCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGC---CACGGGTGCGAGCGCTACGGCAAGG 653939
| || | | |||| ||||| | | || | ||| |
Sbjct 3473 CGGT---CGATAGCGTGTCGGACCTCCTCCGCGAGCACGGCTACCAGTCCCGCGGTTTCG 3529
Query 653940 AGGTGCTCTACCACCCGCACACGG---GCGAGCCCATGGAGGCGTTGATCTT-TTCGGCG 653995
|| | | |||||| ||||||| || ||| || || | |||| ||||||
Sbjct 3530 AGATCATGTACCACGGCCACACGGGCCGCAAGC---TGCGCTCGCAGGTCTTCTTCGGC- 3585
Query 653996 CCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGC 654055
|| |||||||||| ||||||||| ||| | ||||||||||||||| || | ||
Sbjct 3586 CCCACCTACTACCAGCGTCTGCGCCACATGGTCGACGACAAGATCCACGCGCGTGCTCGT 3645
Query 654056 GGCCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCG 654096
|| || ||||||| | || |||||||| ||||| ||
Sbjct 3646 GGGCCGTTGCAGATCATGACGCGCCAGCCGGTGGAGGGTCG 3686
>seq748
Length=13504
Score = 114 bits (126), Expect = 2e-19
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 429510 CTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAAC 429569
||| || ||| |||| || || |||||||| || || ||| | | || | |||
Sbjct 8975 CTCGAGTACGGCTGGAAGGTAGAACGCCACCTTATGACTGGAGACTTCATTATCTTCAAC 9034
Query 429570 CGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGT 429629
|| ||||| || || |||| || ||| ||| | |||| ||| | ||||||
Sbjct 9035 CGTCAGCCATCTCTGCACAAGGAGTCCATGATGGGTCACAGGGTTCGGGTCATGCCTTAC 9094
Query 429630 CGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGAC 429689
||||||||| |||||| || |||| || | ||||||||||| || ||||| |||
Sbjct 9095 TCCACCTTCCGACTCAACTTGTCCGTCACATCTCCTTACAACGCCGATTTCGACGGTGAC 9154
Query 429690 GAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737
||||||||| ||||||| |||||| | ||| | |||| |||||||||
Sbjct 9155 GAGATGAACTTGCACGTCCCCCAGACTGAGGAGACACGTGCCGAAGTC 9202
>seq1698
Length=6690
Score = 111 bits (122), Expect = 2e-18
Identities = 196/280 (70%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|||||||||||| | | | || || | ||||||||| || || || || || ||
Sbjct 1692 AGATCAATCTTGCTGTCCGGATCACTCGAGCTCATCTTTCCA-CCGTGC--AGCCCAGGA 1748
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| |||| |||| ||||| ||||||||||||| ||||| |||
Sbjct 1749 ACCATGGGGTTCAGCAAGTGGGCGCGCTCGCGGTAGCCCAGCTTCGGCAACCAGTCCTTA 1808
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|| | ||| | ||| ||||| || || |||||||| ||||| ||| |||| |
Sbjct 1809 GCCGCCGTAAACAGCTTCCGCTGATCCATACCACCAAACTGCGCGTCACAGTCCAGGTAC 1868
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTC 2411621
||||||||||| |||||| || ||||| | ||| ||| | || | ||| | ||
Sbjct 1869 TGCTCGTCGAGCACCTGCAGGATGGGGTACAGCAGGCCGCTCATAGGGGCGTTATCCGT- 1927
Query 2411622 CATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659
| |||||| |||| |||| |||||| || ||| |||||
Sbjct 1928 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 1967
>seq2787
Length=2954
Score = 107 bits (118), Expect = 3e-17
Identities = 191/276 (69%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 118626 ACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCG 118685
|||||||||||| || ||||| |||| | ||| | |||||| | ||||| | |
Sbjct 982 ACGCCGCGCATGACCATGCACAGGTGGCTGGACTCCATAACGACGGCCACGCCCTGGGGC 1041
Query 118686 CCCGTGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAG 118745
| |||||| ||| | | ||||| || || || |||||| ||||| | |
Sbjct 1042 TGCAGGACCTCCATGACGGCGTTGGCGACCTCCTTGGTCAGGCGCTCCTGGACCTGCAGG 1101
Query 118746 CGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCC---C 118802
||| | | ||| ||| |||||||||| | |||| | |||||||| | || |
Sbjct 1102 CGGCGGGCAAACATCTCGGCGATGCGCGGCAGCTTGGAGATGCCGATGA--CGGCGTTGC 1159
Query 118803 GCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATG 118862
||||| | |||||| | |||| ||||||| | ||||||| ||| |||||||||||||||
Sbjct 1160 GCGGG-ATGTAGCCGATGTGCATCTTGCCGGTGAAGGGCACCAGGTGGTGCTCGCACATG 1218
Query 118863 GAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCG 118898
||| | || ||||| ||| | |||||||||
Sbjct 1219 CTGAACACCTCGATGTCCTTGACGATGACCATCTCG 1254
>seq471
Length=17879
Score = 107 bits (118), Expect = 3e-17
Identities = 166/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263
|| || |||||| | | |||||||| || |||||| || | || |||| || ||||||
Sbjct 4839 GGGCGACACAAGATTGTGATCCTCGACGAAGCCGACAGCATGACCTCGGGCGCGCAGCAG 4898
Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323
|||||||| || ||||| | ||| ||||||| || || || || | || ||||||
Sbjct 4899 GCCCTCCGGCGAACGATGGAGATCTACTCCAACACAACACGCTTCGCCTTTGCGTGCAAC 4958
Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383
||| | | ||||||| | |||||| || ||||||||| |||| | ||
Sbjct 4959 CAGTCCAACAAGATCATCGAGCCGCTCCAGTCGCGCTGCGCCATCCTGCGGTACGCCAAG 5018
Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
|| || ||||||||| | | | ||| || | |||| ||||| || || ||||||
Sbjct 5019 CTGACGGACGCCCAGGTGGTCAAGCGGCTCCTGCAGATCATCGAGGCGGAGAAGGTC 5075
>seq69
Length=40709
Score = 100 bits (110), Expect = 5e-15
Identities = 76/90 (84%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| || || || ||||||||| ||||||| |||||| | |
Sbjct 23447 GTACTTGGTGACGGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCCAGCTCGCCGGGAAG 23506
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
|| ||||| |||| ||||||||||||||
Sbjct 23507 AATGAGGCGGACGGATGTCTGGATCTCGCG 23536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915604323149804
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