Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1383 183 5e-40 seq979 159 5e-33 seq293 127 3e-23 seq1557 123 4e-22 seq748 114 2e-19 seq1698 111 2e-18 seq2787 107 3e-17 seq471 107 3e-17 seq69 100 5e-15 >seq1383 Length=8527 Score = 183 bits (202), Expect = 5e-40 Identities = 244/334 (73%), Gaps = 15/334 (4%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| ||| ||||||||||||||||||||||| Sbjct 7449 ACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCGCGCTT 7390 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || || ||| ||||| |||||||| || || Sbjct 7389 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACAGCAGC 7333 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT--TTGTTGATCCACTTCATC 794514 ||| |||| || |||| |||||| || | | ||| | |||||||| || Sbjct 7332 AAACGCGACCAGGCGCTGGGCAAAGGTC-----GACTTCTGGTCAGTGATCCACCGCAGG 7278 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTC 794573 ||||| || ||||| || | | | ||| | ||||||||||| || ||||| || Sbjct 7277 GCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTCGATGGCATTGAACAGGTGCGTG 7218 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 | || | | || ||||||| ||||||||| ||||| || ||||||||||| |||||||| Sbjct 7217 CG-CTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCAGAGTGGAT 7159 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| || || |||||||||||| || |||||| Sbjct 7158 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 7125 Score = 168 bits (186), Expect = 1e-35 Identities = 192/253 (76%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| |||||||| |||||| |||||| |||||||||||||| ||| Sbjct 7771 TGACGCCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGA 7712 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| | || | |||| ||||||| |||| Sbjct 7711 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTCGACCGGTACACCTTCTCGTTGCCGA 7652 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | ||||| |||||||||||||||||||| ||||||||||| ||| ||| || ||| Sbjct 7651 GGGCGACG--AGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTT 7594 Query 794069 CATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127 |||||||| || || ||| ||||| | |||| ||| ||||| | |||||| |||| Sbjct 7593 CATGCCGAGCAGGGCGCAC-GGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGG 7535 Query 794128 CCTCGATGATGAT 794140 | |||| |||||| Sbjct 7534 CGTCGACGATGAT 7522 >seq979 Length=11123 Score = 159 bits (176), Expect = 5e-33 Identities = 336/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || ||||| || |||| ||| ||||| ||||||||||| | | ||| ||||| Sbjct 3878 TGGTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAA 3819 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 |||||||||||| || | ||| | || | || || | ||| | | |||| Sbjct 3818 GTGCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCG 3759 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 |||||||| ||| |||||| || | ||||| | || || | ||||||||||||||| Sbjct 3758 ATGCCGCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCG 3699 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | ||| ||||| || || || | | | || ||| Sbjct 3698 ATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTGAGGGGTACCG 3639 Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGTG 2073840 || |||||||| ||||| | || ||| | ||| | ||||||| | ||| || Sbjct 3638 GCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTC 3579 Query 2073841 GCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGACG 2073900 ||| |||||| ||| ||| ||| || || ||||| ||| || Sbjct 3578 TCGATGACGCGCTCCA---CGT------TGTC------TCCCCAGATGCCGACGGCAACA 3534 Query 2073901 CGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGAC 2073960 ||||||||||||| ||| || |||||||| | | || | ||| ||||| || Sbjct 3533 CGCATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAG 3474 Query 2073961 CGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGCG 2074020 || ||||||| | |||||||||| |||| | ||| || || | | ||||| Sbjct 3473 CGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGCC 3414 Query 2074021 GCGTCGAGGGCCTCCTTGTGC 2074041 | |||||| ||||||||||| Sbjct 3413 GAGTCGAGCTCCTCCTTGTGC 3393 Score = 123 bits (136), Expect = 4e-22 Identities = 294/445 (66%), Gaps = 12/445 (3%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||| ||||||||||||| | || ||||||| ||||||| |||||| Sbjct 4318 ACTCGATGATCTCAGTGCACAGGTTGGAG--CTGCGGATGGTGCCGAGGTTCTTCTGGTT 4261 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| | ||||| | ||||||| |||||| |||| || |||||| |||| || Sbjct 4260 GCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGC 4201 Query 2071692 CGTGACGATGGCCGACCAAA--TTTGGCGCGCGGGCA--CCGAGGTCCTCGCGCGGCCCT 2071747 | || |||||| |||| | ||| | || | | | | | || || ||||| | Sbjct 4200 CTCGAGGATGGCATACCAGAGCTTTTGGGCCTTGATAGTCTTACGACCGCGGCCGGCCTT 4141 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 | ||||| || || || | || | ||| ||| ||||||| Sbjct 4140 CTCGTACTTCTCAT----ACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGG 4085 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||| ||||| | || | ||| || ||| || | || || ||| || | Sbjct 4084 GGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATGAAGA 4025 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 ||||| |||| ||| | ||||||||||| || ||| |||||||||||||||| Sbjct 4024 GGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGT 3965 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| |||||||| | || | || |||||||||||| ||||| |||||| ||||| Sbjct 3964 TCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCAA 3905 Query 2071988 AGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||| || |||||| ||| || Sbjct 3904 AGGCACCGGGACGCTTGTTGCCACC 3880 >seq293 Length=22244 Score = 127 bits (140), Expect = 3e-23 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| || ||||| ||||||||| |||| |||||| | || |||||||||||||||||| Sbjct 12088 GCCGCAAATTACCTTGACATCAAGGCCCTTCTCGATGTTGGCTGCAAGACCGTGGCCAAC 12147 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||||||||| ||||| ||||| || || || ||||||| | ||| Sbjct 12148 ATGATCAAGGGCAAGTCGCCAGAGGAGATCCGGAAAACGTTCAACATCACGAACG 12202 >seq1557 Length=7509 Score = 123 bits (136), Expect = 4e-22 Identities = 309/461 (67%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 653648 CCCG-AGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG---CAG 653703 |||| || | || ||||| | |||| |||||||| |||||||| ||| | || || Sbjct 3240 CCCGCAGATCGGTGACAAGTTTGCGTCCCGCCACGGTCAAAAGGGTACCATCGGTGTCA- 3298 Query 653704 CGTGCGCTCGACCG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACATCG 653762 | | | || | | |||| ||||||| || | ||| | |||| ||||||||||||| Sbjct 3299 CATAC---CGGCAGGAGGACATGCCGT--TCACGGCG-GAGGGCATCACGCCCGACATCA 3352 Query 653763 TCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCTCC 653822 ||||||||||||||||||| |||||||| |||||||| | | | |||| ||| |||| Sbjct 3353 TCATCAACCCGCACGCCATTCCGTCGCGTATGACCATCGCCCATTTGATCGAGTGTCTCC 3412 Query 653823 TGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTTTGGCGGCGTCA 653882 || ||||||| || || | ||||| | |||||||| ||||| || || ||| | Sbjct 3413 TGTCCAAGGTGTCCACCCTCAAGGGCATGGAGGGCGACGCGACCCCCTTCACCGACGTGA 3472 Query 653883 CCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGC---CACGGGTGCGAGCGCTACGGCAAGG 653939 | || | | |||| ||||| | | || | ||| | Sbjct 3473 CGGT---CGATAGCGTGTCGGACCTCCTCCGCGAGCACGGCTACCAGTCCCGCGGTTTCG 3529 Query 653940 AGGTGCTCTACCACCCGCACACGG---GCGAGCCCATGGAGGCGTTGATCTT-TTCGGCG 653995 || | | |||||| ||||||| || ||| || || | |||| |||||| Sbjct 3530 AGATCATGTACCACGGCCACACGGGCCGCAAGC---TGCGCTCGCAGGTCTTCTTCGGC- 3585 Query 653996 CCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGC 654055 || |||||||||| ||||||||| ||| | ||||||||||||||| || | || Sbjct 3586 CCCACCTACTACCAGCGTCTGCGCCACATGGTCGACGACAAGATCCACGCGCGTGCTCGT 3645 Query 654056 GGCCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCG 654096 || || ||||||| | || |||||||| ||||| || Sbjct 3646 GGGCCGTTGCAGATCATGACGCGCCAGCCGGTGGAGGGTCG 3686 >seq748 Length=13504 Score = 114 bits (126), Expect = 2e-19 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 429510 CTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAAC 429569 ||| || ||| |||| || || |||||||| || || ||| | | || | ||| Sbjct 8975 CTCGAGTACGGCTGGAAGGTAGAACGCCACCTTATGACTGGAGACTTCATTATCTTCAAC 9034 Query 429570 CGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGT 429629 || ||||| || || |||| || ||| ||| | |||| ||| | |||||| Sbjct 9035 CGTCAGCCATCTCTGCACAAGGAGTCCATGATGGGTCACAGGGTTCGGGTCATGCCTTAC 9094 Query 429630 CGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGAC 429689 ||||||||| |||||| || |||| || | ||||||||||| || ||||| ||| Sbjct 9095 TCCACCTTCCGACTCAACTTGTCCGTCACATCTCCTTACAACGCCGATTTCGACGGTGAC 9154 Query 429690 GAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737 ||||||||| ||||||| |||||| | ||| | |||| ||||||||| Sbjct 9155 GAGATGAACTTGCACGTCCCCCAGACTGAGGAGACACGTGCCGAAGTC 9202 >seq1698 Length=6690 Score = 111 bits (122), Expect = 2e-18 Identities = 196/280 (70%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 |||||||||||| | | | || || | ||||||||| || || || || || || Sbjct 1692 AGATCAATCTTGCTGTCCGGATCACTCGAGCTCATCTTTCCA-CCGTGC--AGCCCAGGA 1748 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502 |||| ||||| |||| |||| ||||| ||||||||||||| ||||| ||| Sbjct 1749 ACCATGGGGTTCAGCAAGTGGGCGCGCTCGCGGTAGCCCAGCTTCGGCAACCAGTCCTTA 1808 Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 || | ||| | ||| ||||| || || |||||||| ||||| ||| |||| | Sbjct 1809 GCCGCCGTAAACAGCTTCCGCTGATCCATACCACCAAACTGCGCGTCACAGTCCAGGTAC 1868 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTC 2411621 ||||||||||| |||||| || ||||| | ||| ||| | || | ||| | || Sbjct 1869 TGCTCGTCGAGCACCTGCAGGATGGGGTACAGCAGGCCGCTCATAGGGGCGTTATCCGT- 1927 Query 2411622 CATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659 | |||||| |||| |||| |||||| || ||| ||||| Sbjct 1928 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 1967 >seq2787 Length=2954 Score = 107 bits (118), Expect = 3e-17 Identities = 191/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 118626 ACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGCG 118685 |||||||||||| || ||||| |||| | ||| | |||||| | ||||| | | Sbjct 982 ACGCCGCGCATGACCATGCACAGGTGGCTGGACTCCATAACGACGGCCACGCCCTGGGGC 1041 Query 118686 CCCGTGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAG 118745 | |||||| ||| | | ||||| || || || |||||| ||||| | | Sbjct 1042 TGCAGGACCTCCATGACGGCGTTGGCGACCTCCTTGGTCAGGCGCTCCTGGACCTGCAGG 1101 Query 118746 CGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCC---C 118802 ||| | | ||| ||| |||||||||| | |||| | |||||||| | || | Sbjct 1102 CGGCGGGCAAACATCTCGGCGATGCGCGGCAGCTTGGAGATGCCGATGA--CGGCGTTGC 1159 Query 118803 GCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATG 118862 ||||| | |||||| | |||| ||||||| | ||||||| ||| ||||||||||||||| Sbjct 1160 GCGGG-ATGTAGCCGATGTGCATCTTGCCGGTGAAGGGCACCAGGTGGTGCTCGCACATG 1218 Query 118863 GAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCG 118898 ||| | || ||||| ||| | ||||||||| Sbjct 1219 CTGAACACCTCGATGTCCTTGACGATGACCATCTCG 1254 >seq471 Length=17879 Score = 107 bits (118), Expect = 3e-17 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 || || |||||| | | |||||||| || |||||| || | || |||| || |||||| Sbjct 4839 GGGCGACACAAGATTGTGATCCTCGACGAAGCCGACAGCATGACCTCGGGCGCGCAGCAG 4898 Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 |||||||| || ||||| | ||| ||||||| || || || || | || |||||| Sbjct 4899 GCCCTCCGGCGAACGATGGAGATCTACTCCAACACAACACGCTTCGCCTTTGCGTGCAAC 4958 Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGC 2019383 ||| | | ||||||| | |||||| || ||||||||| |||| | || Sbjct 4959 CAGTCCAACAAGATCATCGAGCCGCTCCAGTCGCGCTGCGCCATCCTGCGGTACGCCAAG 5018 Query 2019384 CTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 || || ||||||||| | | | ||| || | |||| ||||| || || |||||| Sbjct 5019 CTGACGGACGCCCAGGTGGTCAAGCGGCTCCTGCAGATCATCGAGGCGGAGAAGGTC 5075 >seq69 Length=40709 Score = 100 bits (110), Expect = 5e-15 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| || || || ||||||||| ||||||| |||||| | | Sbjct 23447 GTACTTGGTGACGGCCTTGGTGCCTTCCGACACGGCGTGCTTGGCCAGCTCGCCGGGAAG 23506 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 || ||||| |||| |||||||||||||| Sbjct 23507 AATGAGGCGGACGGATGTCTGGATCTCGCG 23536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915604323149804