Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1557 84.2 9e-11 >seq1557 Length=7509 Score = 84.2 bits (92), Expect = 9e-11 Identities = 120/167 (72%), Gaps = 13/167 (8%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | |||||| |||||||| || |||||||| | |||||||||| ||||| Sbjct 3405 CTCGATCAAATGGGCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTC 3346 Query 309744 AGGTCTCAT----TCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAA 309798 || | || |||| | |||| ||||| || || | | |||| | | | Sbjct 3345 GGGCGTGATGCCCTCCGCCG-------TGAACGGCATGTCCTCCTGCCGGTATG-TGACA 3294 Query 309799 CCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || || || ||||||||| |||| | ||| |||||||||||||| || Sbjct 3293 CCGATGGTACCCTTTTGACCGTGGCGGGACGCAAACTTGTCACCGAT 3247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951823441619808