Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq979 183 3e-41 >seq979 Length=11123 Score = 183 bits (202), Expect = 3e-41 Identities = 980/1538 (64%), Gaps = 41/1538 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || ||||| || |||| ||||| | | || | ||| ||| | ||| Sbjct 4931 TTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGC 4872 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || | || || ||||| | ||||| | ||| | ||||| |||||| ||| | Sbjct 4871 TCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGG 4812 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | ||| || || | ||| | | | ||| ||| |||| | | | ||||||||| Sbjct 4811 AGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAG 4752 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC-TCGACTGGCGGGACT 147131 | | ||||| ||||||||||||||||||||||| | || | | | |||| | Sbjct 4751 AGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCGGGGAT 4692 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191 || | | || | ||| | || | || |||| || || || || || Sbjct 4691 -CCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCAGAGC 4633 Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251 | | || ||||| ||| |||||| || || || | || || |||| | Sbjct 4632 CGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACTCGAA 4573 Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311 |||||| || || || || |||||||||| ||||||| |||||||||||| || || Sbjct 4572 AGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGGGGCG 4513 Query 147312 ATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAATC 147369 || ||||||| | || ||| || | || ||||||||| || || ||| Sbjct 4512 GTGGCGCATGTTGCTGTTGTAAGC-CTC-CTGGACCGGGTAGTGGTTGACGTCGATGATC 4455 Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA-AGT 147428 ||||| ||||| || || || |||| | | | | || |||| ||| ||||| | Sbjct 4454 TTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAGACA 4395 Query 147429 CCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGT 147488 ||| | || | || ||| | || | ||| | || ||||| ||||||||||| Sbjct 4394 CCCTTGTTGTAGTCG-ACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGGCAAC 4336 Query 147489 CTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCC 147548 ||| |||| | ||||| | ||| || | |||||||||| || ||| || Sbjct 4335 CTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCC 4276 Query 147549 CAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 147608 | || | ||| ||||| || || ||||| || ||| |||||||| | || ||| Sbjct 4275 GAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCC 4216 Query 147609 GGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTG 147665 ||||||| || | || | ||| | ||| || | || || | || Sbjct 4215 GGTCTCGGTCTGAGCCTCGAGGATGGCATACC---AGAGCTTTTGGGCCTTGATAGTCTT 4159 Query 147666 CCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCA 147725 ||| |||||| | || |||||| ||| |||| ||| |||||||| || ||||| Sbjct 4158 ACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCA 4099 Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785 ||||||||||||||| |||| | || |||||||| | |||| ||| | | || Sbjct 4098 ATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGAC 4039 Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATC 147845 || ||| || || || || | ||| || || | |||||||| || | || Sbjct 4038 ACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTC 3979 Query 147846 CTCGGCGCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGT 147903 ||| ||| ||| || | | | || | | ||| |||||||||||| || Sbjct 3978 CTCCTTGCCGTGGTT--CTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGC 3921 Query 147904 TCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCACC 147960 || | ||||| ||| | ||||| |||| || || || ||||| || | ||| | Sbjct 3920 TCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCG 3861 Query 147961 ATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTG 148020 ||||||| || || || | |||||| | ||| | | ||||||||||||| | Sbjct 3860 GTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCG 3801 Query 148021 ATCT-TGCTGCCGCGGGCTCGCAC---TTC-GTGCACGTTAACGCCAATGCCGCC-GCCG 148074 || | || | | | |||||| | | ||| | ||| | ||| |||||||| ||| Sbjct 3800 ATGTATGATCCAG-----TCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCA 3746 Query 148075 TACTTTGATATGGCAGCGCAA-TC-GCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 | ||| || || |||||| || | |||| ||||||||| ||||||||||| | Sbjct 3745 T-CTTGGAAATCATGGCGCAAGTCTTAAGACTGTC--GTAGATGCCCTCGATGCTGTCAT 3689 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG-AGAAA 148191 || | | | | || || || || | | || || | | | | ||| || ||| Sbjct 3688 CCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGGCGTTGAAG 3630 Query 148192 AGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCG 148251 |||||||| || || || || || || | ||| | | || ||||| || || Sbjct 3629 AGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCTCGATGACG 3570 Query 148252 TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGT 148311 || | || ||| || ||||| | || || ||||||| |||||||||||| || Sbjct 3569 CGCTCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCTGTGGGCGC 3510 Query 148312 TCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370 ||| ||| |||| ||||| ||| || || ||| || ||||| ||| | ||||| Sbjct 3509 TCGACAATCTTG-CCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAA 3451 Query 148371 GTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||| ||| | || || | || || | ||||||| Sbjct 3450 GTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGCCG 3413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476575239684960