Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq979 183 3e-41
>seq979
Length=11123
Score = 183 bits (202), Expect = 3e-41
Identities = 980/1538 (64%), Gaps = 41/1538 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || ||||| || |||| ||||| | | || | ||| ||| | |||
Sbjct 4931 TTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGC 4872
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || | || || ||||| | ||||| | ||| | ||||| |||||| ||| |
Sbjct 4871 TCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGG 4812
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| ||| || || | ||| | | | ||| ||| |||| | | | |||||||||
Sbjct 4811 AGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAG 4752
Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC-TCGACTGGCGGGACT 147131
| | ||||| ||||||||||||||||||||||| | || | | | |||| |
Sbjct 4751 AGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCGGGGAT 4692
Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191
|| | | || | ||| | || | || |||| || || || || ||
Sbjct 4691 -CCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCAGAGC 4633
Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251
| | || ||||| ||| |||||| || || || | || || |||| |
Sbjct 4632 CGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACTCGAA 4573
Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311
|||||| || || || || |||||||||| ||||||| |||||||||||| || ||
Sbjct 4572 AGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGGGGCG 4513
Query 147312 ATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAATC 147369
|| ||||||| | || ||| || | || ||||||||| || || |||
Sbjct 4512 GTGGCGCATGTTGCTGTTGTAAGC-CTC-CTGGACCGGGTAGTGGTTGACGTCGATGATC 4455
Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA-AGT 147428
||||| ||||| || || || |||| | | | | || |||| ||| ||||| |
Sbjct 4454 TTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAGACA 4395
Query 147429 CCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGT 147488
||| | || | || ||| | || | ||| | || ||||| |||||||||||
Sbjct 4394 CCCTTGTTGTAGTCG-ACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGGCAAC 4336
Query 147489 CTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCC 147548
||| |||| | ||||| | ||| || | |||||||||| || ||| ||
Sbjct 4335 CTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCC 4276
Query 147549 CAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 147608
| || | ||| ||||| || || ||||| || ||| |||||||| | || |||
Sbjct 4275 GAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCC 4216
Query 147609 GGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTG 147665
||||||| || | || | ||| | ||| || | || || | ||
Sbjct 4215 GGTCTCGGTCTGAGCCTCGAGGATGGCATACC---AGAGCTTTTGGGCCTTGATAGTCTT 4159
Query 147666 CCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCA 147725
||| |||||| | || |||||| ||| |||| ||| |||||||| || |||||
Sbjct 4158 ACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCA 4099
Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785
||||||||||||||| |||| | || |||||||| | |||| ||| | | ||
Sbjct 4098 ATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGAC 4039
Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATC 147845
|| ||| || || || || | ||| || || | |||||||| || | ||
Sbjct 4038 ACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTC 3979
Query 147846 CTCGGCGCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGT 147903
||| ||| ||| || | | | || | | ||| |||||||||||| ||
Sbjct 3978 CTCCTTGCCGTGGTT--CTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGC 3921
Query 147904 TCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCACC 147960
|| | ||||| ||| | ||||| |||| || || || ||||| || | ||| |
Sbjct 3920 TCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCG 3861
Query 147961 ATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTG 148020
||||||| || || || | |||||| | ||| | | ||||||||||||| |
Sbjct 3860 GTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCG 3801
Query 148021 ATCT-TGCTGCCGCGGGCTCGCAC---TTC-GTGCACGTTAACGCCAATGCCGCC-GCCG 148074
|| | || | | | |||||| | | ||| | ||| | ||| |||||||| |||
Sbjct 3800 ATGTATGATCCAG-----TCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCA 3746
Query 148075 TACTTTGATATGGCAGCGCAA-TC-GCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132
| ||| || || |||||| || | |||| ||||||||| ||||||||||| |
Sbjct 3745 T-CTTGGAAATCATGGCGCAAGTCTTAAGACTGTC--GTAGATGCCCTCGATGCTGTCAT 3689
Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCG-AGAAA 148191
|| | | | | || || || || | | || || | | | | ||| || |||
Sbjct 3688 CCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGGCGTTGAAG 3630
Query 148192 AGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCG 148251
|||||||| || || || || || || | ||| | | || ||||| || ||
Sbjct 3629 AGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCTCGATGACG 3570
Query 148252 TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGT 148311
|| | || ||| || ||||| | || || ||||||| |||||||||||| ||
Sbjct 3569 CGCTCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCTGTGGGCGC 3510
Query 148312 TCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370
||| ||| |||| ||||| ||| || || ||| || ||||| ||| | |||||
Sbjct 3509 TCGACAATCTTG-CCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAA 3451
Query 148371 GTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
||||| ||| | || || | || || | |||||||
Sbjct 3450 GTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGCCG 3413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476575239684960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |