Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq353 125 8e-24
>seq353
Length=20357
Score = 125 bits (138), Expect = 8e-24
Identities = 270/402 (67%), Gaps = 10/402 (2%)
Strand=Plus/Minus
Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165
||||| |||||| | |||||||| ||||| || ||||| ||||| ||| || |||
Sbjct 5749 ACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGACCATGTTGGGCATGTCGGCCGGG 5690
Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225
|||||||| || ||| || || | | |||||| || | | | | |
Sbjct 5689 TTCCAGGCGCTGAGCACGAGGCGGCGGTCGAAGGGGTTGGTCCGCAGCGTGTGCACGATG 5630
Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285
| | ||||||||| || |||||||| ||||| ||| ||| |||||||||| ||
Sbjct 5629 CGCGCCAGCTGGTCGACCCCCTGGCCGGAGTAGTCGGTCGCGCTGTCCACGTACTGCGCG 5570
Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAG 147345
|| ||||||| ||||||||| |||||||| || |||||||| || || | ||| |
Sbjct 5569 CCGAAGTGCCGCCACTGGAACCCGTACACGGGACCCAGGTCCCCC-----TCCGCGCGGG 5515
Query 147346 AAGCCCGCCCG--CTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400
| | | | ||| |||| || |||||| | || |||| | |||||||||| || |
Sbjct 5514 AGGTCAGGCCGAGCTTGTCAAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGC 5455
Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCA 147460
| | | |||||| | || ||| ||| |||||||||||| ||||| | |
Sbjct 5454 CTTGTGAGGAGAGGGTGTGTGACGAGGTGTCGCCGGAGATGAACCAGAGGAGCTCGGCGA 5395
Query 147461 AAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
|| | | ||||| | |||||||| || |||||||
Sbjct 5394 TCACGGCTTTGGTGAAGACGCGTTTGGTGGTGAGGAGGGGGA 5353
Score = 120 bits (132), Expect = 4e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985
||||||||||| ||||| ||||||||||| |||| | ||| | ||| |||
Sbjct 6007 TCCACGTGGTTCAGGTACACGTGCGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACC 5948
Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045
||| || |||||| |||| ||||| || ||||||| ||||||||| |||||||| ||
Sbjct 5947 AGGTCGCACACGTGCGCCAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGC 5888
Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
|| ||||| |||||||| | ||| | ||||| ||||||||
Sbjct 5887 ACGCCCAGCCCCATGTCGCACGAGCGTTGGTAGAGCTGGCA 5847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583443975830400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |