Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 255 8e-62
seq979 152 7e-31
seq1557 113 6e-19
seq2787 105 1e-16
seq471 93.3 6e-13
>seq1383
Length=8527
Score = 255 bits (282), Expect = 8e-62
Identities = 371/511 (73%), Gaps = 20/511 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || ||||||||||||||| | ||||
Sbjct 6912 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACC 6970
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| | ||| | ||||| | | | |||||| ||| | ||||||
Sbjct 6971 TCTCCAAGGACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGTACTTCATCT 7030
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| ||||||| ||| |||||||| || |||||||| ||||||||||| ||
Sbjct 7031 CTCACATCCTCGC-TTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAG 7089
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| || | || ||||| |||||||||
Sbjct 7090 CGCTTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATG 7149
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || |||||||||||||| |||||||| || || || ||||||||| ||||||| ||
Sbjct 7150 ATGGAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCT 7209
Query 1456072 GTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| | || | || ||||| || ||||||||||| | || | | | || |||||
Sbjct 7210 GCCCAG-CGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGC 7268
Query 1456131 CGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187
||||||||| || |||||||| || || || ||||| ||||||| |||| ||
Sbjct 7269 CGACTGGGCCCTGCGGTGGATCACTGACCAGAAG----TCGAC-CTTTGCCCAGCGCCTG 7323
Query 1456188 GTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTTTT 1456244
|||| ||||| || |||||||| ||||| ||| ||| || || | | ||||||| |
Sbjct 7324 GTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCCATCTTCT 7381
Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||||||||||||||||||||||||| ||
Sbjct 7382 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCT 7412
Score = 174 bits (192), Expect = 2e-37
Identities = 197/259 (76%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
||||||||||| ||||| |||||| | ||||| ||| |||| | |||||| ||
Sbjct 7522 ATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCACCGAGGCCCTGCCGTGCGCC 7581
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| ||||||||||| ||| | || ||| |||||||||| | || |||||||||||||
Sbjct 7582 CTGCTCGGCATGAACTCCAAC-CTGATGAAGCAGTACATTG-AGTTCGTCGCCGACCGCC 7639
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||||| || |||||| | |||||| |||||| || | ||||| ||| | |||
Sbjct 7640 TGCTCGTCGCCCTCGGCAAC-GAGAAGGTGTACCGGTCGACAAACCCCTTCGACTTCATG 7698
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| ||||| |||| |||||||||||||| |||||| ||||| |||||||||
Sbjct 7699 GAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTACCAG 7758
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||||||||||| ||||
Sbjct 7759 AAGGCCGGCGTCATGGCCA 7777
>seq979
Length=11123
Score = 152 bits (168), Expect = 7e-31
Identities = 339/505 (67%), Gaps = 23/505 (5%)
Strand=Plus/Plus
Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740
||||||||||| |||||| | ||||| | | | ||| ||||| |||| ||||||
Sbjct 3393 GCACAAGGAGGAGCTCGACTCGGCCATTGTCTATGACCGGGACTTCAACTACCAGTACTT 3452
Query 259741 TGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGC----GCGATATTGTCGTCG 259796
||| | |||| || || || ||||| | ||| | || | |||||||
Sbjct 3453 TGGCTTCAAGACCCTGGAGCGCTCATACCTC-CTGAAGCTCAACGGCAAGATTGTCG--- 3508
Query 259797 AGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCG 259856
|||| || ||| | ||| |||||||||| ||| | ||| | |||| || |
Sbjct 3509 AGCGCCCACAGCACATGATCATGCGTGTTGCCGTCGGCA--TCTGGG------GA----G 3556
Query 259857 ACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCT 259916
|||| | |||||| ||| ||| || ||| | |||||| | |||| |||||
Sbjct 3557 ACAACG---TGGAGCGCGTCATCGAGACATACAACCTCATGTCCAACAAGTTCTTCACAC 3613
Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976
|| | ||||| ||||| || ||||| || || | | ||| ||| || ||||| |
Sbjct 3614 ATGCCTCCCCCACCCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCC 3673
Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036
|| | |||||||||| || |||||||||||||| |||| || ||| |||||
Sbjct 3674 TGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACAGTCTTAAGACTTGCGCCA 3733
Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCG 260096
| || |||||| ||| ||||||||||| | | ||| | || || | ||
Sbjct 3734 TGATTTCCAAGATGGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGAT 3793
Query 260097 CCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTA 260156
| ||| | || |||||||||||| ||||| ||| | | |||||||| || || || |
Sbjct 3794 CATACATCGCCGGCACCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCA 3853
Query 260157 ACGACACGGCGCGCTACGTCGACCA 260181
|| |||| || |||||||| |||||
Sbjct 3854 ACAACACCGCCCGCTACGTTGACCA 3878
Score = 127 bits (140), Expect = 3e-23
Identities = 336/514 (65%), Gaps = 20/514 (4%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| |||||| || ||||||||| |||||| || || |||||||||||| ||
Sbjct 3880 GGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACCTCGAGCCTTGGCACGCCGACGTC 3939
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
| | | || |||||| |||||||||||||||| ||| ||| || ||||
Sbjct 3940 TTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGA----GGAAGTCCGTGCTCGCG- 3994
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
||||||| | ||| |||| |||||| || ||| || | | || | |
Sbjct 3995 -ATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGA 4053
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|| ||| | || | ||||| |||| |||||||| ||| |||||||| | |
Sbjct 4054 GAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCTATGGTGACGAG 4113
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084
|| || ||||| |||||| || ||| || | ||
Sbjct 4114 TTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGACTATCAAGGCC 4173
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
| | || |||||| ||||| ||| ||| || | ||||||||||| |||| ||||
Sbjct 4174 ---CAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 4230
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGA 262203
|||||||||| | ||||| | ||||||||| ||||||| ||||||| | |||
Sbjct 4231 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCCGCAG- 4289
Query 262204 GGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAA 262263
||||||||||||| |||||| || ||| ||| | ||| ||||| || |||||
Sbjct 4290 CTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCCGTCTGCAA 4349
Query 262264 CCT---CTCGAGCGTGGCCCTGCCCAAGTTTGTC 262294
||| |||| ||||||| || |||| |||
Sbjct 4350 CCTGGCCTCG---CTGGCCCTTCCTCAGTTCGTC 4380
Score = 118 bits (130), Expect = 2e-20
Identities = 356/546 (65%), Gaps = 14/546 (3%)
Strand=Plus/Plus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTC 262931
||||| ||||||||||||||| || ||| | | ||||||| | || |||
Sbjct 4746 CGGCCTCTGGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAG 4805
Query 262932 GTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGC 262991
|||||| | |||| |||||| || ||| |||||||||| ||||||||||||| |||
Sbjct 4806 CTTGCTCCTCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATG 4865
Query 262992 GTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGT 263051
|||||| | |||| |||||||||| ||| || || | | || || || ||
Sbjct 4866 CTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGT 4925
Query 263052 GGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCG 263111
||||||| | || | ||| | | || | || || ||| | | || |
Sbjct 4926 TGTCAACCCCTGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAA 4985
Query 263112 CGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCC 263171
|||| |||| || | || ||| | ||| || | | | ||| |
Sbjct 4986 GAACCGCATCATCGCCGATGGTGGTTCGATCCAG------AACATCCCTAACATCCCGAC 5039
Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATAT 263231
|||| |||||||||||| ||||||||| ||||| | | | || | || | ||
Sbjct 5040 CGATATCAAGGCTCTCTACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGAT 5099
Query 263232 GGCGGCCGACCGCGCGCCCTAT-GTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290
||| ||||| || | || || | |||| ||| ||||||||||||| | || | ||
Sbjct 5100 GGCTGCCGATCGTG-GCGCTTTCATCGATCAGTCCCAGTCGCTCAACATTCACATGCGCG 5158
Query 263291 ACCCG---ACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCA 263347
| ||| | || | || ||||| |||||| | | ||| | || ||||
Sbjct 5159 AGCCGAGCATGGGCAAG---ATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCA 5215
Query 263348 AGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCG 263407
|||| ||||||||||| || ||||||| | | || ||| | ||||||||||||| ||||
Sbjct 5216 AGACGGGCATGTACTACCTCCGCACCCAGGCTGCCGCCCAGCCCATTCAATTCACTGTCG 5275
Query 263408 ATCAGG 263413
| ||||
Sbjct 5276 ACCAGG 5281
>seq1557
Length=7509
Score = 113 bits (124), Expect = 6e-19
Identities = 314/464 (68%), Gaps = 32/464 (7%)
Strand=Plus/Minus
Query 1600295 CGGCCCTCGACCGGCTGCTTGGTGAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATC 1600354
|| ||||| |||||||| || | ||||| | || || || | || ||||| |||
Sbjct 3686 CGACCCTCCACCGGCTGGCGCGTCATGATCTGCAACGGCCCACGAGCACGCGCGTGGATC 3627
Query 1600355 TTGTCGATGGCCACGTGGCGCAGGGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGC 1600413
|||||| | ||| ||||||||| |||||||||| || |||| | |||| | ||
Sbjct 3626 TTGTCGTCGACCATGTGGCGCAGACGCTGGTAGTAGGTGGG-GCCGAAGAAGACCTGCGA 3568
Query 1600414 CTCCATGGGCTCGCCG---GTGTGCGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCA 1600470
|| ||| || | ||||| |||||| | | ||| ||| | || | |
Sbjct 3567 GCGCA---GCTTGCGGCCCGTGTGGCCGTGGTACATGATCTCGAAACCGCGGGACTGGTA 3511
Query 1600471 TCCGTGGCGAGCCAACTCGGCGG--CGACATCG---TCGACGGTGACGCCGCCAAAGGGC 1600525
||||| | || | || || ||||| || ||||| || ||| || |||||
Sbjct 3510 GCCGTG-CTCGCGGA---GGAGGTCCGACA-CGCTATCGACCGTCACGTCGGTGAAGGGG 3456
Query 1600526 GTGCCGTCGCCCACATAGCCCTCGCGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATC 1600585
|| |||||||| | ||||| | || || ||||||| |||||| ||| ||||
Sbjct 3455 GTCGCGTCGCCCTCCATGCCCTTGAGGGTGGACACCTTGGACAGGAGACACTCGATCAAA 3396
Query 1600586 TTGCCCATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATCACAATGTCGGGCGTG--G 1600643
| | | |||||||| |||||||| ||||||||||||||||| | |||||||||||| |
Sbjct 3395 TGGGCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATGATGTCGGGCGTGATG 3336
Query 1600644 CACCGCCGCGAGGCGACCAGGGCATGTCCTCGGTGGAGCGCACGCTG---CCCACGGTGC 1600700
| || |||| || | ||||||||||| || | | | | || || | ||| |
Sbjct 3335 C-CCTCCGC----CGTGAACGGCATGTCCTC-CTGCCG-GTATG-TGACACCGATGGTAC 3284
Query 1600701 CCTTTTGGCCGTGGCGCGACGACAGTTTGTCGCCCACCT-CGGG 1600743
||||||| |||||||| |||| | ||||| || | || ||||
Sbjct 3283 CCTTTTGACCGTGGCGGGACGCAAACTTGTCACCGATCTGCGGG 3240
>seq2787
Length=2954
Score = 105 bits (116), Expect = 1e-16
Identities = 235/350 (67%), Gaps = 6/350 (2%)
Strand=Plus/Minus
Query 2133382 TGGCGCGCATGGCCGACGCCACGAGGACCATGCTGGTCTGCCTGGGCGAGGATGTGACGC 2133441
||||||||||| | |||| | ||| |||| | ||| |||||||||| | |
Sbjct 1432 TGGCGCGCATGAAGGGCGCCGTCCGCACCCTGCTCGAGTGCGTGGGCGAGGACCCGGACC 1373
Query 2133442 GCGAGGGCCTCCTGGACACACCCATGCGCGTGGCCAAGGCCATGGTGGAGCGCACGCGCG 2133501
|||||||| | |||| || || ||| |||||||| ||| | | ||| |
Sbjct 1372 GCGAGGGCGTGCTGGCGACCCCGGACCGCTACGCCAAGGCGATGCTCTACTTCACCAAGG 1313
Query 2133502 GCCATCGCATGACCCTGGCCGACGCCGTCGGCGGCGCCCTCTTTGACGAGGCGTCGGACG 2133561
|| | | || | || |||| ||| ||||||| |||| | |||| |||
Sbjct 1312 GCTACCAGGAGAACGTGCGCGACATCGTGAACGGCGCCATCTTCCAGGAGGGCCACAACG 1253
Query 2133562 AGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTGCCCT 2133621
||||||| | || || || || | ||| ||||||||||||||||||| ||||||
Sbjct 1252 AGATGGTCATCGTCAAGGACATCGAGGTGTTCAGCATGTGCGAGCACCACCTGGTGCCCT 1193
Query 2133622 TTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAA---GATCATCGGTCTGAGCA 2133678
| | ||||||| ||| | |||||| | ||||| |||| ||||||| | ||
Sbjct 1192 TCACCGGCAAGATGCACATCGGCTACAT-CCCGC--GCAACGCCGTCATCGGCATCTCCA 1136
Query 2133679 AGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTTCCAAGTACAGGAG 2133728
|| | |||||||||| ||| |||||| || |||| | || || ||||||
Sbjct 1135 AGCTGCCGCGCATCGCCGAGATGTTTGCCCGCCGCCTGCAGGTCCAGGAG 1086
>seq471
Length=17879
Score = 93.3 bits (102), Expect = 6e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935
||||||||||| || || ||| || | |||||||| | | ||| |||||| ||
Sbjct 5008 CGCAGGATGGCGCAGCGCGACTGGAGCGGCTCGATGATCTTGTTGGACTGGTTGCACGCA 4949
Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995
| ||| || || || || |||| | | ||||| || |||||||||||| || ||
Sbjct 4948 AAGGCGAAGCGTGTTGTGTTGGAGTAGATCTCCATCGTTCGCCGGAGGGCCTGCTGCGCG 4889
Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054
||| || | || |||||| ||||||||||| | |||||||| ||||| || || ||
Sbjct 4888 CCCGAGGTCATGCTGTCGGCTTCGTCGAGGATCACAATCTTGTGTCGCCCCTGAGGGAG 4830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177229016705832
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