Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4893 145 7e-30
seq88 131 2e-25
seq2035 122 8e-23
seq2403 102 7e-17
>seq4893
Length=312
Score = 145 bits (160), Expect = 7e-30
Identities = 166/219 (76%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
|||| |||||| || ||||| |||||||| || |||||||| ||| | || ||| ||
Sbjct 302 CTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCG 243
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| |||| |||||| ||||| || |||| |||||||||||||| ||||| || |||||||
Sbjct 242 TCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTG 183
Query 35642 TCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGT 35697
||| |||||| ||| | |||| | | |||||| |||| |||||||||| |||
Sbjct 182 TCCTGGATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGCGT 127
Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || || | || || || || || |||||
Sbjct 126 AATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq88
Length=36327
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | || | ||||| || | || |||||||| ||||||||||| |||| |
Sbjct 33113 CCACCGCGGAGCCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 33054
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || || ||||| || ||||| |||| ||||||||||| | |||
Sbjct 33053 AAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 32994
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||| || |||||| ||||| | | | | |||||| ||| || |||
Sbjct 32993 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAACC 32934
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || ||||||| || ||||| || ||||||||
Sbjct 32933 TCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | || |||||| || | ||||||||||| || |||||||| |||| |
Sbjct 33341 CCGCCACGGAGACGCAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAC 33282
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||| |||||| ||||| || ||||| ||||||||||| | ||
Sbjct 33281 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGGG 33222
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||| ||| |||||| ||| | |||| | | ||| || ||||||||
Sbjct 33221 ATACCCTCCTTATCCTGAATCTTTGACTTGA-CGTTGTCGATCGTATCCGAAGATTCCAC 33163
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || ||||| || ||||| | || || || || ||||||||
Sbjct 33162 TTCCAGAGTAATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 33115
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| || ||||| || || |||||||| | | || || | || || || || || |||
Sbjct 32855 GTGCTTTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCCTCGAGTTGTTTGCCC 32796
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| |||| ||||||||||| | ||||| | |||||||||| |||||| |||
Sbjct 32795 GCAAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT- 32737
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | |||||| || |||||||| | ||||| || || || |||| ||
Sbjct 32736 AACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAGGGT 32677
Query 35719 TTTCACAAATATCTGCAT 35736
|| || || || |||||
Sbjct 32676 CTTGACGAAGATTTGCAT 32659
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| || || || |||| ||| || || | || |||| |||||| || |||||
Sbjct 32622 CTCCTTTTGGATATTATAGTCGGACAAAGTCCGACCATCTTCCAACTGCTTGCCGGCAAA 32563
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | || | || |||||||||| ||||| ||| | | |
Sbjct 32562 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTAACATT 32503
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | || || || |||||||| | ||||| || || || ||||
Sbjct 32502 GTCGATGGTATCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCA 32453
>seq2035
Length=5329
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || || |||||||| | | ||| | | || || |||||||| ||
Sbjct 1052 GTGCTCTCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATCCTCAAGCTGCTTGCCA 1111
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| |||| ||||||||||| | || | || |||||||||| |||||| |||
Sbjct 1112 GCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1171
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | | ||||||||||| |||||||| | ||||| || || ||||| | ||
Sbjct 1172 ACATTGTCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 1231
Query 35720 TTCACAAATATCTGCAT 35736
||||| || ||||||||
Sbjct 1232 TTCACGAAGATCTGCAT 1248
>seq2403
Length=4098
Score = 102 bits (112), Expect = 7e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| ||||||||||| || | | || || | || || ||||| || |||||||| |
Sbjct 2169 CCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGA 2228
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | |||| || |||||||||| |||||| ||| | | |
Sbjct 2229 TCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2288
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||| || || ||||| | ||||| || |||||||| | || ||||| |
Sbjct 2289 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 2348
Query 35727 ATATCTGCA 35735
| |||||||
Sbjct 2349 AGATCTGCA 2357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450759587622880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |