Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 107 6e-18
seq979 107 6e-18
>seq1383
Length=8527
Score = 107 bits (118), Expect = 6e-18
Identities = 126/169 (75%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||| | | |||| || ||||| ||||||| ||||| || | || || ||||| |||
Sbjct 7308 CTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTT 7367
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| ||||||||||||||| | || ||||| || || |||| ||| |||||||| ||||
Sbjct 7368 T-GCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
| || ||| || ||||||||| | || |||||||||||| || ||
Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCT 7475
>seq979
Length=11123
Score = 107 bits (118), Expect = 6e-18
Identities = 360/546 (66%), Gaps = 26/546 (5%)
Strand=Plus/Plus
Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031
||||| || || ||| ||||||| ||||||||| || |||||||| || ||||| |||
Sbjct 3826 GGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCGCTACGTTGACCAAGGTGGC 3885
Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAA 255088
||| || || || || || |||||||||| ||||| ||||||||||| | ||||
Sbjct 3886 AACAAGCGTCCCGGTGCCTTTGCCATCTACCTCGAGCCTTGGCACGCCGACGTCTTTGA- 3944
Query 255089 CGGTT--TTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCT 255146
||| | || | || | || ||||| ||||| | || ||||| |||
Sbjct 3945 --GTTCCTCGACCTCCGT--AAGAACCACGGCAAGGAGGAAGTCCGTGCTCGCGATCTCT 4000
Query 255147 ACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGG 255205
| || ||||| ||| || || ||| || || || | || |||| |||
Sbjct 4001 TCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGAGA-GTGG 4059
Query 255206 AGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAA 255265
| || ||||| |||||| | ||||| || | ||| | | ||||||||||| ||
Sbjct 4060 ACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCTATGGTGACGAGTTCGAG 4119
Query 255266 AAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACG----CCAAGTGCCCGCGA 255320
|||||| | |||||||| |||||||| | ||||| | |||| ||||
Sbjct 4120 GCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGACTATCAAG-GCCC---- 4174
Query 255321 AGAAGATCTGGAACACGATGGT-GCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTG 255379
| ||| ||||| | | || | | | | ||| || ||||| | || ||| | |
Sbjct 4175 AAAAGCTCTGGTATGCCATCCTCGAGGCT-CAGACCGAGACCGGCAACCCCTTCATGCTC 4233
Query 255380 CACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTC 255438
|||| || ||| || |||| | | ||||| ||| ||| || || ||| ||||
Sbjct 4234 TACAAGGATCACTGCAACCGCAAGAGC-AACCAGAAGAACCTCGGCACCATCCGCAGCTC 4292
Query 255439 GAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTT 255498
||||||||||| ||||| | | || || || | | ||||| ||||| |||||| |
Sbjct 4293 CAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCCGTCTGCAACCT 4352
Query 255499 GGCGTC 255504
||| ||
Sbjct 4353 GGCCTC 4358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588213164050020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |