Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq979 271 9e-68
seq1383 134 2e-26
>seq979
Length=11123
Score = 271 bits (300), Expect = 9e-68
Identities = 1155/1802 (64%), Gaps = 27/1802 (1%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||||||||| ||||||||||| || |||||||| | | ||||| ||
Sbjct 5237 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTG 5178
Query 117897 AACTTGGAGAGGGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955
| |||| | | | || || | |||| | ||| | ||||| |||||||||||
Sbjct 5177 ATCTTGCCCATGCTCGG-CTCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAA 5119
Query 117956 -GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCC 118014
||| || ||||| || ||||| | || || | ||||||||| || |||
Sbjct 5118 AGCG-CCACGATCGGCAGCCATCTGAACGACGGTGCGCTGAGAGATTTCCCAAACGGTCT 5060
Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074
||||||| ||| ||||| ||||| | ||| || ||||| || ||||| |
Sbjct 5059 TGTAGAGAGCCTTGATATCGGTCGGGATGTTAGGGATGTTCTGGATCGAACCACCATCGG 5000
Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134
|| ||| | | |||||| | | ||||||||||| || | || |||| || ||
Sbjct 4999 CGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACAAGGTCCTTCAAGA 4940
Query 118135 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 118194
| |||||||| |||||||| || | | || | | | ||||| |||| ||
Sbjct 4939 GCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACG 4880
Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254
|||| ||||| ||||| || ||||| |||| |||||| | || ||||| || |||||||
Sbjct 4879 TGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGG 4820
Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314
| || | ||| | |||||| |||| ||| | ||| | || ||||||| |||||||
Sbjct 4819 GCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCC 4760
Query 118315 AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACG 118374
|||| || | | | | | | |||||| || ||||||||||||| |||||
Sbjct 4759 AGTCCCAGAGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATA 4700
Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 118434
| || ||||| ||| | ||| |||| ||| | ||| |||| ||| | ||
Sbjct 4699 CCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGG 4640
Query 118435 CGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 118494
|| || |||||||| || || || || || | ||||| | |||||| |
Sbjct 4639 TCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAG 4580
Query 118495 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 118554
| || || | | || | | || |||| || || || |||||||||| ||| |
Sbjct 4579 ACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGA 4520
Query 118555 TTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGA 118614
| ||||| || | ||| || || ||| || || || || || ||||
Sbjct 4519 TGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGA 4460
Query 118615 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 118674
| | | | || || || || || | | || ||| || ||||| | | | |||
Sbjct 4459 TGATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCAT 4400
Query 118675 AACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 118734
| | | | | | ||| ||| ||||||||| | || ||||| || || || |
Sbjct 4399 AGACACCCTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGG 4340
Query 118735 AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGG 118794
||| || | | |||||| || || || ||||||| ||| || || ||||
Sbjct 4339 CAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGG 4280
Query 118795 TGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCG 118854
|||| | |||||| || || ||| ||| || ||||||||| |||||| | ||
Sbjct 4279 TGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 4220
Query 118855 TCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTG 118913
| || ||||| || || | || ||| || || | ||||| | | | || | | |||
Sbjct 4219 TGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTG-ATAGT- 4162
Query 118914 GCGTTGG--CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCA 118971
| | | | || || | | ||||||||| || ||||| || ||||| |||||
Sbjct 4161 -CTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCAT 4103
Query 118972 CGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCT 119031
| || | || || || || | ||||| | |||| ||| | || || ||
Sbjct 4102 AGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCT 4043
Query 119032 CAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAG 119091
| || ||||||||||||||||| || |||||||| ||| ||||||||| ||| ||
Sbjct 4042 CGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGA 3983
Query 119092 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 119151
|||| || | || || || ||| | || | || || | || || |||||||| |
Sbjct 3982 CTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAG 3923
Query 119152 GTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCG 119208
| || ||||| | || | | || ||| ||| | |||| || || | |
Sbjct 3922 GCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGG 3863
Query 119209 CAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCC 119267
| ||| ||| || ||||| ||||| || ||||| |||| ||| ||| || || ||
Sbjct 3862 CGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGG 3803
Query 119268 CGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCA 119326
||| || || | | | || | || |||||||| | || || || ||||||
Sbjct 3802 CGATGTATGATCC--AGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCAT 3745
Query 119327 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT 119386
||| || || ||||| | | |||||| ||||||| || ||||| |||| ||||
Sbjct 3744 CTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTT 3685
Query 119387 ATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAG 119445
| ||| |||||||| || | || |||||| || ||||| ||||||||||| |
Sbjct 3684 CATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGGG 3626
Query 119446 TTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACG-GC 119503
| || | || || |||| | || | | |||||| || ||| ||||| | |||| ||
Sbjct 3625 TGGGGGAGGCATGTGTGAAGA-ACTTGTTGGACATGAGGTTGTATGTCTCGATGACGCGC 3567
Query 119504 GGGA--ATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTT 119561
| ||||| ||| | || |||| | || ||||| | ||||| || ||
Sbjct 3566 TCCACGTTGTCTCCCCAG---ATGCCGACGGCAACACGCATGATCATGTGCTGTGGGCGC 3510
Query 119562 TCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAA 119621
|| | | | || | |||| || ||||||| ||||| |||||||| |||||
Sbjct 3509 TCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAAG 3450
Query 119622 TA 119623
||
Sbjct 3449 TA 3448
>seq1383
Length=8527
Score = 134 bits (148), Expect = 2e-26
Identities = 304/451 (67%), Gaps = 6/451 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || || || ||||||||||||||||| ||||| ||| | | ||| ||||||||
Sbjct 7754 TACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATG 7695
Query 129788 AAATCAAATGGGTTCTTTGA--GTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || || ||||| | || | | || || || | | | | ||| || |
Sbjct 7694 AAGTCGAAGGGGTTTGTCGACCGGTACACCTT-CTCGTTGCCGAGGGCGAC-GAGCAGGC 7637
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
| || | |||| |||||||||||| |||| | ||||||||| |||| ||| |
Sbjct 7636 GGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCGC 7577
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
| || || || || || |||| ||| ||| ||| ||| || || | |||| | |
Sbjct 7576 ACGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGGCGTCGACGATGATGTCCT 7517
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCC 130024
|||| || | ||| || | ||| || || | ||| || ||| || ||
Sbjct 7516 CAATGACCTGCTTGCTGGGGCGGTTGTT-AAGGTGCGAGAACAGCAGGCAGGCGAAGTCG 7458
Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084
|||||||||||||||||| |||||||| || || |||||| ||| || ||||||||
Sbjct 7457 GTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGG 7398
Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
|| |||||||| | |||||| || | ||| | || ||||||||| ||||| |||
Sbjct 7397 CCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACA 7338
Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|| ||||| | || |||| |||||||
Sbjct 7337 GCAGCAAACGCGACCAGGCGCTGGGCAAAGG 7307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618388539064160
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