Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq979 219 5e-52
seq1383 125 8e-24
seq1628 96.9 4e-15
>seq979
Length=11123
Score = 219 bits (242), Expect = 5e-52
Identities = 1117/1746 (64%), Gaps = 45/1746 (3%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTC 104277
||||||| ||||| ||||||| || ||| |||| || |||||| |||| | ||
Sbjct 3513 CCCACAGCACATGATCATGCGTGTTGCCGTCGGCATC--TGGGGA-GACAACGTGGAGCG 3569
Query 104278 TGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCC 104336
||| | ||||||||| || |||||| | | || | |||| || || | || ||||
Sbjct 3570 CGTCATCGAGACATACAACCTCATGTCCAACAAGT-TCTTCACACATGCCTCCCCCACCC 3628
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
||||||| || ||||| || |||| | ||| ||||||||| ||| || ||||
Sbjct 3629 TCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCCTGGTCGACATGAAGG 3688
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTG 104454
| ||| ||| | || ||||| | | ||||| | | | ||||| | || || |||
Sbjct 3689 ATGACAGCATCGAGGGCATCTACGACAGTCTTAAG-ACT-TGCGCCATGATTTCCAAGAT 3746
Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
||| || || || || | ||||||| | | || | | ||| || ||
Sbjct 3747 GGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCATACATCGCCGG 3806
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| || || || |||| || || || ||||| || || || ||| ||| || ||
Sbjct 3807 CACCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCG 3866
Query 104575 CTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628
||| || | |||| ||| ||||| || | | || |||| || |||||
Sbjct 3867 CTACGTTGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTCGAGCC 3923
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
|||||||| || || | |||||||| || | ||| ||||| || | ||||| |
Sbjct 3924 TTGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAGT 3983
Query 104689 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|| ||| |||||||||||| || ||||||||||| || |||||||||||| | || |
Sbjct 3984 CCG-TGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCG 4042
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
|| ||| || | ||| |||| | || || || || || || || ||||| |
Sbjct 4043 AGAAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCT 4102
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA 104867
||||| ||||| || ||||| || ||||||||| | | || || | | ||
Sbjct 4103 ATGGTGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGA 4162
Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
| | | || | | | | ||| | || || ||| || |||| |||||||| || |
Sbjct 4163 CTAT-CAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAAC 4221
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||||| ||||| || ||| |||| ||||| || || ||||| | ||
Sbjct 4222 CCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 4281
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
||| || ||||| || || || || ||| | || | | | || ||| ||
Sbjct 4282 ATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCC 4341
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106
|| || ||||| || || | || || || ||| || || | | | |||| | | |
Sbjct 4342 GTCTGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGA-CTACA-ACAAGGGTGTCT 4399
Query 105107 --GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
|| | | || || |||||||| | || || ||||| |||| | |
Sbjct 4400 ATGACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGCAACCTGAACAAGATCA 4459
Query 105165 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224
| || || ||||| || || ||| || || ||| | ||||| || |
Sbjct 4460 TCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAACATGCGCCACCGCCCCA 4519
Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GAT 105283
| || ||||||| ||||| || || |||| ||| | |||| | || ||| ||
Sbjct 4520 TCGGCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCGCTTCGC-ATGCCTTTCGAG 4578
Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343
|| ||| || || | ||| || || || |||||||| |||||||| |||||
Sbjct 4579 TCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATCTATCACGCGGCTCT- 4637
Query 105344 GA--GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401
|| | | || | || |||| ||| | || |||| |||| ||| || || |
Sbjct 4638 GACCGCCTCGTGC-GATCTGGCCAAGGAGCAAGGCACATACTCGACCTATGAAGGATCCC 4696
Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTAC 105460
| | || || || | || || | || |||||| || || | || | | | ||
Sbjct 4697 CGGTATCCCAGGGTATCCTCCAGTACGACATGTGG-AACGTCACGCCGACCGGCCTCTGG 4755
Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520
|||||||| || ||||||| ||||||||| | ||| | || ||||| | ||| |
Sbjct 4756 GACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAGCTTGCTCCTC 4815
Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580
|| || ||||| || ||||| || | |||||| |||| || || |||||||| || |||
Sbjct 4816 GCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATGCTTCGAGCCC 4875
Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 105640
|||||| | |||||||| | | | | | | || || ||||| | ||||||||
Sbjct 4876 TACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACCCC 4935
Query 105641 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 105700
||| || | ||||| || || |||||||||||| | | |||||| | | |||
Sbjct 4936 TGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCGCATC 4995
Query 105701 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTG 105760
| | |||||||| || || || || | || || | || || ||| |
Sbjct 4996 ATCGCCGATGGTGGTTCGATCCAGAACATCCCTAACATCCCGACCGATATCAAGGCTCTC 5055
Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820
||| || |||||||||||| | ||| || | ||||| || ||||||||
Sbjct 5056 TACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGATGGCTGCCGATCGTGG- 5114
Query 105821 CGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG-GAAAGTCCAACGATGTC 105876
||| ||||| |||| |||| ||| | || | |||| | || || | |||
Sbjct 5115 CGCTTTCATCGATC--AGTCCCAGTCGCTCAACATTCACATGCGCGAG-CCGAGCATGGG 5171
Query 105877 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936
|||| || | |||||| | | | |||||| |||||||| ||||| ||||| ||
Sbjct 5172 CAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACGGGCATGTACTA 5231
Query 105937 CCTCCG 105942
||||||
Sbjct 5232 CCTCCG 5237
>seq1383
Length=8527
Score = 125 bits (138), Expect = 8e-24
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
||||||| |||| || |||| ||||| ||| ||||||||||||||| ||| |||
Sbjct 7307 CCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCT 7366
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
| | | || | |||||||||||||| || |||||||| || || |||||||||||
Sbjct 7367 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||| ||||| ||||||||||| ||||||
Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCAC 7455
>seq1628
Length=7110
Score = 96.9 bits (106), Expect = 4e-15
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
||| ||||| || || ||||| || ||||||| |||||| || || | ||| ||
Sbjct 3986 CTTGCCCACCGCGTCGATCTCGTCGATGAAGATGATGCAGGGCGCGTTCTTGCGCGCCGT 4045
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812
| ||||| ||||| ||||| |||||||||||| || |||||||| || || | |
Sbjct 4046 GGCGAAGAGGTCCCGGACACGGGAGGCGCCCACACCGACGAACATCTCGACGAACTCGGA 4105
Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| || | || || | |||||| || | || || || || | || ||| || ||
Sbjct 4106 ACCGCTG-ACGCTGTA-GAAGGGCACCTGCGACTCGCCAGCCGTCGCCTTGGCAAGGAGC 4163
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||||||| ||||| || || | |||| |||||| || || |||||||||||
Sbjct 4164 GTCTTACCGGTACCGGGGGGGCCGGACAGGATGGCACCGCGAGGGATCTTGGCGCC 4219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583216792972640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |