Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq979 219 5e-52 seq1383 125 8e-24 seq1628 96.9 4e-15 >seq979 Length=11123 Score = 219 bits (242), Expect = 5e-52 Identities = 1117/1746 (64%), Gaps = 45/1746 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTC 104277 ||||||| ||||| ||||||| || ||| |||| || |||||| |||| | || Sbjct 3513 CCCACAGCACATGATCATGCGTGTTGCCGTCGGCATC--TGGGGA-GACAACGTGGAGCG 3569 Query 104278 TGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCC 104336 ||| | ||||||||| || |||||| | | || | |||| || || | || |||| Sbjct 3570 CGTCATCGAGACATACAACCTCATGTCCAACAAGT-TCTTCACACATGCCTCCCCCACCC 3628 Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396 ||||||| || ||||| || |||| | ||| ||||||||| ||| || |||| Sbjct 3629 TCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCCTGGTCGACATGAAGG 3688 Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAAGTG 104454 | ||| ||| | || ||||| | | ||||| | | | ||||| | || || ||| Sbjct 3689 ATGACAGCATCGAGGGCATCTACGACAGTCTTAAG-ACT-TGCGCCATGATTTCCAAGAT 3746 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 ||| || || || || | ||||||| | | || | | ||| || || Sbjct 3747 GGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCATACATCGCCGG 3806 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || || || |||| || || || ||||| || || || ||| ||| || || Sbjct 3807 CACCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACAACACCGCCCG 3866 Query 104575 CTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628 ||| || | |||| ||| ||||| || | | || |||| || ||||| Sbjct 3867 CTACGTTGACCAAGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTCGAGCC 3923 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||||| || || | |||||||| || | ||| ||||| || | ||||| | Sbjct 3924 TTGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAGT 3983 Query 104689 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| |||||||||||| || ||||||||||| || |||||||||||| | || | Sbjct 3984 CCG-TGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCG 4042 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||| || | ||| |||| | || || || || || || || ||||| | Sbjct 4043 AGAAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGCT 4102 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA 104867 ||||| ||||| || ||||| || ||||||||| | | || || | | || Sbjct 4103 ATGGTGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAGA 4162 Query 104868 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 | | | || | | | | ||| | || || ||| || |||| |||||||| || | Sbjct 4163 CTAT-CAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAAC 4221 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||| ||||| || ||| |||| ||||| || || ||||| | || Sbjct 4222 CCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 4281 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046 ||| || ||||| || || || || ||| | || | | | || ||| || Sbjct 4282 ATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGCC 4341 Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106 || || ||||| || || | || || || ||| || || | | | |||| | | | Sbjct 4342 GTCTGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGA-CTACA-ACAAGGGTGTCT 4399 Query 105107 --GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164 || | | || || |||||||| | || || ||||| |||| | | Sbjct 4400 ATGACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGCAACCTGAACAAGATCA 4459 Query 105165 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 | || || ||||| || || ||| || || ||| | ||||| || | Sbjct 4460 TCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAACATGCGCCACCGCCCCA 4519 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GAT 105283 | || ||||||| ||||| || || |||| ||| | |||| | || ||| || Sbjct 4520 TCGGCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCGCTTCGC-ATGCCTTTCGAG 4578 Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343 || ||| || || | ||| || || || |||||||| |||||||| ||||| Sbjct 4579 TCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATCTATCACGCGGCTCT- 4637 Query 105344 GA--GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 || | | || | || |||| ||| | || |||| |||| ||| || || | Sbjct 4638 GACCGCCTCGTGC-GATCTGGCCAAGGAGCAAGGCACATACTCGACCTATGAAGGATCCC 4696 Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTAC 105460 | | || || || | || || | || |||||| || || | || | | | || Sbjct 4697 CGGTATCCCAGGGTATCCTCCAGTACGACATGTGG-AACGTCACGCCGACCGGCCTCTGG 4755 Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 |||||||| || ||||||| ||||||||| | ||| | || ||||| | ||| | Sbjct 4756 GACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCGGAACAGCTTGCTCCTC 4815 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || || ||||| || ||||| || | |||||| |||| || || |||||||| || ||| Sbjct 4816 GCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAACGAATGCTTCGAGCCC 4875 Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 105640 |||||| | |||||||| | | | | | | || || ||||| | |||||||| Sbjct 4876 TACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTTCCAGGTTGTCAACCCC 4935 Query 105641 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 105700 ||| || | ||||| || || |||||||||||| | | |||||| | | ||| Sbjct 4936 TGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAACATGAAGAACCGCATC 4995 Query 105701 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTG 105760 | | |||||||| || || || || | || || | || || ||| | Sbjct 4996 ATCGCCGATGGTGGTTCGATCCAGAACATCCCTAACATCCCGACCGATATCAAGGCTCTC 5055 Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820 ||| || |||||||||||| | ||| || | ||||| || |||||||| Sbjct 5056 TACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGATGGCTGCCGATCGTGG- 5114 Query 105821 CGC-TTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATG-GAAAGTCCAACGATGTC 105876 ||| ||||| |||| |||| ||| | || | |||| | || || | ||| Sbjct 5115 CGCTTTCATCGATC--AGTCCCAGTCGCTCAACATTCACATGCGCGAG-CCGAGCATGGG 5171 Query 105877 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936 |||| || | |||||| | | | |||||| |||||||| ||||| ||||| || Sbjct 5172 CAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACGGGCATGTACTA 5231 Query 105937 CCTCCG 105942 |||||| Sbjct 5232 CCTCCG 5237 >seq1383 Length=8527 Score = 125 bits (138), Expect = 8e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| |||| || |||| ||||| ||| ||||||||||||||| ||| ||| Sbjct 7307 CCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCT 7366 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | | | || | |||||||||||||| || |||||||| || || ||||||||||| Sbjct 7367 TTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACG 7426 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||| ||||||||||| |||||| Sbjct 7427 AGCTCATCTCGCGTGACGAGGGTCTCCAC 7455 >seq1628 Length=7110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 ||| ||||| || || ||||| || ||||||| |||||| || || | ||| || Sbjct 3986 CTTGCCCACCGCGTCGATCTCGTCGATGAAGATGATGCAGGGCGCGTTCTTGCGCGCCGT 4045 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812 | ||||| ||||| ||||| |||||||||||| || |||||||| || || | | Sbjct 4046 GGCGAAGAGGTCCCGGACACGGGAGGCGCCCACACCGACGAACATCTCGACGAACTCGGA 4105 Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | || | || || | |||||| || | || || || || | || ||| || || Sbjct 4106 ACCGCTG-ACGCTGTA-GAAGGGCACCTGCGACTCGCCAGCCGTCGCCTTGGCAAGGAGC 4163 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||||| ||||| || || | |||| |||||| || || ||||||||||| Sbjct 4164 GTCTTACCGGTACCGGGGGGGCCGGACAGGATGGCACCGCGAGGGATCTTGGCGCC 4219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583216792972640