Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq88 105 6e-18
>seq88
Length=36327
Score = 105 bits (116), Expect = 6e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| | || || ||||| ||||| | || || | || || | || ||
Sbjct 32453 TGACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCTGATACCATCGACAATGTTAAGT 32512
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| ||||| ||||| || ||||| || ||||| || ||||| | || | |||||||
Sbjct 32513 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTTGCCGGCA 32572
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
| || |||||||| || ||| | ||||| || || || ||||||||||||||| | |
Sbjct 32573 AGCAGTTGGAAGATGGTCGGACTTTGTCCGACTATAATATCCAAAAGGAGTCGACCCTCC 32632
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| | || | || |||| ||||| ||
Sbjct 32633 ACCTCGTCCTTCGCCTGCGTGGTGGTAT 32660
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| || ||| | || || | || || || ||||
Sbjct 32887 ATGCAGATTTTCGTGAAGACCCTGACGGGAAAGACCATCACATTGGAGGTTGAGTCGTCA 32946
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| | || || || || ||||| || || || || || || || ||
Sbjct 32947 GACACGATTGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCTCCTGACCAG 33006
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||||| ||| | || || || ||| | ||||| ||||||
Sbjct 33007 CAGCGCCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGGACTTTGTCCGACTACAAC 33066
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||| ||| | || ||||| | || | || ||||||||
Sbjct 33067 ATTCAGAAGGAGAGCACCCTCCACTTGGTCCTCCGGCTCCGCGGTGGCAT 33116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434885585406720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |