Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq4893 82.4 5e-11
>seq4893
Length=312
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || || |||||||| || ||||| | || || || ||| |
Sbjct 88 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 147
Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| ||| |||| ||||| || || ||||| || || |||| ||| |
Sbjct 148 GACACGATCGACAAC--GTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 205
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| ||| | ||||| || || || || ||||| |||| || | | ||| ||||
Sbjct 206 AGCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACA 265
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998
||||||| || |||||||| ||||| |||||
Sbjct 266 ACATCCAGAAGGAGAGCACGTTGCACTTGGT 296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355836221427372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |