Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq88 161 2e-34
seq2035 159 8e-34
seq4893 150 4e-31
seq2403 140 8e-28
seq5961 91.5 3e-13
seq979 91.5 3e-13
>seq88
Length=36327
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| |||||| || || ||||| || ||||||| ||| || | |||||
Sbjct 32870 AGGACAAGGTGCAGAGTGCTTTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCC 32811
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || ||||| || || || ||||| || ||||||||||||| || |||||||||
Sbjct 32810 TCGAGTTGTTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 32751
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || |||||||| ||||| |||
Sbjct 32750 TGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 32691
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | |||||
Sbjct 32690 TTCCCGGTCAGGGTCTTGACGAAGATTTGCAT 32659
Score = 136 bits (150), Expect = 9e-27
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| |||||||| ||||| || | | |||| ||||||
Sbjct 32642 AGGACGAGGTGGAGGGTCGACTCCTTTTGGATATTATAGTCGGACAAAGTCCGACCATCT 32583
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| || || || ||||| || ||||| || || | || |||||||||
Sbjct 32582 TCCAACTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 32523
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || |||||||| |||||| || ||||| || ||||| |||
Sbjct 32522 TGAATCTTCGACTTAACATTGTCGATGGTATCAGAGGACTCCACCTCAAGGGTGATGGTC 32463
Query 211083 TTTCCCGT 211090
|| || ||
Sbjct 32462 TTGCCGGT 32455
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || ||| ||| || || ||||| || || | | |||| |||||
Sbjct 33098 AGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAAGTCCGACCATCC 33039
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || || || ||||| || ||||||||||| | || ||||| ||
Sbjct 33038 TCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCT 32979
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || || ||||| || |||||||| | ||||| |||
Sbjct 32978 TGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAACCTCCAATGTGATGGTC 32919
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || ||||| || || | ||||||
Sbjct 32918 TTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
>seq2035
Length=5329
Score = 159 bits (176), Expect = 8e-34
Identities = 165/215 (77%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| || ||||| || ||||||| |||||||| |||||
Sbjct 1037 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATCC 1096
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| ||||| || |||||||| || | || |||||||||
Sbjct 1097 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1156
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || || || ||||| ||||| ||| || ||||| || |||||
Sbjct 1157 TGGATCTTGGACTTGACATTGTCGATTGTGTC---GCTCGACTCCACCTCAAGGGTGATA 1213
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| || || | ||||||
Sbjct 1214 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1248
>seq4893
Length=312
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||| || || | ||| | ||| ||| || |||||||| || || || ||||
Sbjct 305 AGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGC 246
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || |||| ||||||||| ||||| || || || || ||||| ||||||| || |||
Sbjct 245 CCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCC 186
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||||||||| || ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 185 TTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTA 126
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || || || |||||||| || | |||||
Sbjct 125 ATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq2403
Length=4098
Score = 140 bits (154), Expect = 8e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || ||||| || || | || || | ||||| || ||||| ||||| || |||||
Sbjct 2171 TTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGATC 2230
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| || |||| || ||||||||||||||||| || || || |||
Sbjct 2231 AGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2290
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|||||||| ||| || |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 2291 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGAAG 2350
Query 211107 ACCTGCA 211113
| |||||
Sbjct 2351 ATCTGCA 2357
>seq5961
Length=206
Score = 91.5 bits (100), Expect = 3e-13
Identities = 96/125 (77%), Gaps = 6/125 (5%)
Strand=Plus/Minus
Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052
|| ||||| || || | |||||||||||||||||||| || ||||| ||||| |||
Sbjct 204 TGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTG 145
Query 211053 TCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|| ||| ||||||||| || ||||||||||| || || || |||||||| || |
Sbjct 144 TC---GCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATT 88
Query 211110 TGCAT 211114
|||||
Sbjct 87 TGCAT 83
>seq979
Length=11123
Score = 91.5 bits (100), Expect = 3e-13
Identities = 184/270 (68%), Gaps = 6/270 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | |||| || ||| ||||| |||||||| | ||
Sbjct 4272 GTTCTTCTGGTTGCTCTTGCGGTTGCAG-TG--ATCCTTGTAGAGCATGAAGGGGTTGCC 4216
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||| | |||||| |||| ||| || ||| |||| ||||| || ||||||
Sbjct 4215 GGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTGATAGTCTTACG 4156
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| || | ||||||||||| | || || ||||||| || |||||| |||
Sbjct 4155 ACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCAATC 4096
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| || ||||| ||| |||||||| | ||| |||||| |||| | || || ||
Sbjct 4095 GGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACG 4036
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359
|||||||||||||| | |||||| |||
Sbjct 4035 CTTCATGAAGAGGTCGGGAATCCAGAGGGC 4006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159062355531140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |