Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq88 98.7 7e-16
seq2403 89.7 3e-13
>seq88
Length=36327
Score = 98.7 bits (108), Expect = 7e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| |||||||| || ||||| | || ||||| || |
Sbjct 32887 ATGCAGATTTTCGTGAAGACCCTGACGGGAAAGACCATCACATTGGAGGTTGAGTCGTCA 32946
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || || || || ||| | || || || ||
Sbjct 32947 GACACGATTGACAATGTGAAGTC-GAAGATCCAAGATAAGGAGGGTATCCCTCCTGACCA 33005
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||||||||| ||||| || || | || ||||| ||| |||||
Sbjct 33006 GCAGCGCCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGGACTTTGTCCGACTACAA 33065
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 33066 CATTCAGAAGGAG 33078
Score = 98.7 bits (108), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || ||||| ||||| ||||| || || ||
Sbjct 33115 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATTACTCTGGAAGTGGAATCTTCG 33174
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || ||| ||| || || || ||| | || ||||| ||
Sbjct 33175 GATACGATCGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGACCAG 33234
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || || || ||||| || |||| || | || ||| | ||| ||||||
Sbjct 33235 CAGCGTTTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCCGACTACAAC 33294
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 33295 ATCCAGAAGGAG 33306
>seq2403
Length=4098
Score = 89.7 bits (98), Expect = 3e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||| ||||| || ||||||||||| || || ||||| ||||| || || ||| |||
Sbjct 2357 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGG 2298
Query 23672 ACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 2297 ACACCATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2239
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| |||||||| || || || | |||||| | || ||||||
Sbjct 2238 CAGCGCCTGATCTTTGCGGGCAAACAGCTCGAGGATGGCCGCACTCTCTCTGACTACAAC 2179
Query 23791 ATACAAAA 23798
|| || ||
Sbjct 2178 ATTCAGAA 2171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337984734746288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |