Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq979 98.7 1e-15
>seq979
Length=11123
Score = 98.7 bits (108), Expect = 1e-15
Identities = 267/409 (65%), Gaps = 0/409 (0%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|| ||||| || || |||||||||| | ||| || || | | || || || |||||
Sbjct 4088 CCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATG 4029
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
||||| || || ||||| || || | || ||||| || | | ||| || || ||
Sbjct 4028 AAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG 3969
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || ||||| ||||| | | || | ||||| || || || || ||
Sbjct 3968 TGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATG 3909
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | || || || || || || || || || | || | ||||||||| || |
Sbjct 3908 GCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAG 3849
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| || || || || || || || || || || || | || || ||||
Sbjct 3848 ACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCA 3789
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
| || || || ||| | || || || ||||||||||| || || | |||
Sbjct 3788 GTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCG 3729
Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
||| || | | |||||||| ||||| || ||||||||| ||||||
Sbjct 3728 CAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGT 3680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694616387239040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |