Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq979 98.7 1e-15 >seq979 Length=11123 Score = 98.7 bits (108), Expect = 1e-15 Identities = 267/409 (65%), Gaps = 0/409 (0%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||| || || |||||||||| | ||| || || | | || || || ||||| Sbjct 4088 CCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATG 4029 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||| || || ||||| || || | || ||||| || | | ||| || || || Sbjct 4028 AAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG 3969 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| || ||||| ||||| | | || | ||||| || || || || || Sbjct 3968 TGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATG 3909 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || || || || | || | ||||||||| || | Sbjct 3908 GCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAG 3849 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| || || || || || || || || || || || | || || |||| Sbjct 3848 ACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCA 3789 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || ||| | || || || ||||||||||| || || | ||| Sbjct 3788 GTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCG 3729 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 ||| || | | |||||||| ||||| || ||||||||| |||||| Sbjct 3728 CAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGT 3680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694616387239040