Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq979 98.7 1e-15 >seq979 Length=11123 Score = 98.7 bits (108), Expect = 1e-15 Identities = 415/652 (64%), Gaps = 10/652 (2%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || || || || ||||||| | |||||| || | | || || || ||||| Sbjct 4088 CCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATG 4029 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 ||||| || || ||||| || || | || ||||| || | | ||| || || || Sbjct 4028 AAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG 3969 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| || || |||||||| | | || | ||||| || || || || || Sbjct 3968 TGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATG 3909 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | |||| || || || || || || || || | || | ||| ||||| || | Sbjct 3908 GCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAG 3849 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | | ||| || || ||||| || || || || || || || | || || |||| Sbjct 3848 ACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCA 3789 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| || || ||||| || || |||||||| || || || | || Sbjct 3788 GTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCG 3729 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || || | |||| ||||||||||| || || |||||| |||||| | || || Sbjct 3728 CAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAG 3669 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 || || | || ||| || || || || || | || || || ||||| ||| Sbjct 3668 CAAGAGGAAAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTG 3609 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAAC-TGCTTC----TATATCCCATT 77084 || | || | || | || |||||||| || || || ||| | | | |||| Sbjct 3608 AAGAACTTGTTGGACATGAGGTTGTATGTCTCGATGACGCGCTCCACGTTGTCTCCC-CA 3550 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 |||| || || || |||||||| | ||| ||||| || || || ||| |||| | Sbjct 3549 GATG----CCGACGGCAACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGT 3494 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 | | |||| | |||||| |||| || || || ||||| || | ||| Sbjct 3493 TGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTA 3442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712880609099520