Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq979 98.7 1e-15
>seq979
Length=11123
Score = 98.7 bits (108), Expect = 1e-15
Identities = 415/652 (64%), Gaps = 10/652 (2%)
Strand=Plus/Minus
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609
|| || || || || || ||||||| | |||||| || | | || || || |||||
Sbjct 4088 CCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACGCTTCATG 4029
Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
||||| || || ||||| || || | || ||||| || | | ||| || || ||
Sbjct 4028 AAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG 3969
Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729
||||| || || |||||||| | | || | ||||| || || || || ||
Sbjct 3968 TGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATG 3909
Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789
|| | |||| || || || || || || || || | || | ||| ||||| || |
Sbjct 3908 GCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGCGGTGTTGTTGAAG 3849
Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849
|| | | ||| || || ||||| || || || || || || || | || || ||||
Sbjct 3848 ACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGCGATGTATGATCCA 3789
Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909
||||| || || ||||| || || |||||||| || || || | ||
Sbjct 3788 GTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCATCTTGGAAATCATGGCG 3729
Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969
|| || | |||| ||||||||||| || || |||||| |||||| | || ||
Sbjct 3728 CAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTTCATGTCGACCAGGAAG 3669
Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029
|| || | || ||| || || || || || | || || || ||||| |||
Sbjct 3668 CAAGAGGAAAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCATGTGTG 3609
Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAAC-TGCTTC----TATATCCCATT 77084
|| | || | || | || |||||||| || || || ||| | | | ||||
Sbjct 3608 AAGAACTTGTTGGACATGAGGTTGTATGTCTCGATGACGCGCTCCACGTTGTCTCCC-CA 3550
Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144
|||| || || || |||||||| | ||| ||||| || || || ||| |||| |
Sbjct 3549 GATG----CCGACGGCAACACGCATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGT 3494
Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
| | |||| | |||||| |||| || || || ||||| || | |||
Sbjct 3493 TGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTA 3442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712880609099520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |