Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq88 111 4e-19
seq2035 100 7e-16
seq4893 95.1 3e-14
seq2403 89.7 1e-12
>seq88
Length=36327
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||| ||| || ||||||||||| |||| | ||| | ||||| || |
Sbjct 33321 CAAG-TGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGACCATCCTCCA 33263
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || |||||||| | | ||||||||| | | ||| || ||||| || ||||
Sbjct 33262 ACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAA 33203
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| ||||| | || | | || ||| || ||||| |||||||| || || |
Sbjct 33202 TCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCACTTCCAGAGTAATCGTCTTCC 33143
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||| ||||| ||||||| ||||||
Sbjct 33142 CCGTGAGGGTCTTGACGAAGATCTGCAT 33115
Score = 93.3 bits (102), Expect = 1e-13
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||| || || |||||||| |||| ||||| |
Sbjct 33105 GAGCCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAAGTCCG 33046
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||| || || || | ||||||||| | | ||| || ||
Sbjct 33045 ACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTC 32986
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || || ||| | || | ||||||| ||| || || | ||
Sbjct 32985 CTTATCTTGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAACCTCCAATGT 32926
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || ||||||||||| | ||||||
Sbjct 32925 GATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
>seq2035
Length=5329
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || ||| || ||||| |||||||| | | || || |||||
Sbjct 1036 GAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATC 1095
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 1096 CTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1155
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | |||| ||| || ||||| || |||||
Sbjct 1156 CTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 1215
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||||| ||||||||||||| ||||||
Sbjct 1216 CTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1248
>seq4893
Length=312
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| ||| | ||| | ||| || || | || || |||||
Sbjct 279 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 220
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
|| |||| ||||||||||| | || || ||||| || || || || ||||| |
Sbjct 219 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 160
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | ||||||| ||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 159 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 100
Query 152093 GAAGACCTGCAT 152104
||||| |||||
Sbjct 99 GAAGATTTGCAT 88
>seq2403
Length=4098
Score = 89.7 bits (98), Expect = 1e-12
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| || |||||||| || | | ||| | ||||| || || ||| || || |||||
Sbjct 2171 TTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGATC 2230
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||| | | || || ||||| || || || || |||||| | ||
Sbjct 2231 AGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2290
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| || ||| || || || || || || || |||||||| ||||||||||||
Sbjct 2291 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGAAG 2350
Query 152097 ACCTGCA 152103
| |||||
Sbjct 2351 ATCTGCA 2357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153731567826156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |