Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq5693 257 2e-63
seq5276 244 1e-59
>seq5693
Length=229
Score = 257 bits (284), Expect = 2e-63
Identities = 189/218 (87%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||| |||||||||| ||||||||||||| ||| ||||| |||| | |||||||||
Sbjct 9 TCTCGCTCTGTTGCCGAGGCTGGAGTGCAATGGTGTGATCCTGGCTCGCCGCAACCTCCA 68
Query 8404 CCTCCC-GGGTTCAAGCT--ATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGG 8460
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 69 CCTCCCTGGGTTCAAGCTGTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGG 128
Query 8461 CAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGT 8520
|| ||||||||||| ||||||||||||||||||| |||||| ||||||| ||| ||
Sbjct 129 CACCTGCCACCACGCCCGGCTAATTTTTGTATTTTTACTAGAGATGGGGTTTCGCCACGT 188
Query 8521 TGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATC 8558
||||||| |||||||| |||||||| ||||| ||||||
Sbjct 189 TGGCCAGCCTGGTCTCAAACTCCTGGCCTCAAGTGATC 226
>seq5276
Length=269
Score = 244 bits (270), Expect = 1e-59
Identities = 206/248 (83%), Gaps = 5/248 (2%)
Strand=Plus/Minus
Query 8364 TGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATT 8423
||||||||||||| | |||| |||||| ||||||||||||||| |||||||| |||
Sbjct 269 TGGAGTGCAGTGGTGT-ATCTTGGCTCACCGCAACCTCCGCCTCCTCAGTTCAAGCAATT 211
Query 8424 CTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAA 8483
|| || || |||||||| | |||||||| | ||||| ||||||| || ||||||
Sbjct 210 CTTCTCCC-CAGCCTCCCGCAGAGCTGGGACTGCAGGCGCCCACCACCACACCCAGCTAA 152
Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543
||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||
Sbjct 151 TTTTTGTATTTTTAGTAGAGA-CGGGTTTCACCATGTTGGCCAGGACAGTCTCGATCTCC 93
Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603
|||||||| ||||||||| |||| ||||||| |||||||||| |||||||| ||||||
Sbjct 92 TGACCTCA--TGATCCACCCTCCTCAGCCTCCCGAAGTGCTGGGGTTACAGGCGTGAGCC 35
Query 8604 ACCGCGCC 8611
|| | |||
Sbjct 34 ACTGTGCC 27
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521448653730400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |