Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5693 257 2e-63 seq5276 244 1e-59 >seq5693 Length=229 Score = 257 bits (284), Expect = 2e-63 Identities = 189/218 (87%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||||||| ||||||||||||| ||| ||||| |||| | ||||||||| Sbjct 9 TCTCGCTCTGTTGCCGAGGCTGGAGTGCAATGGTGTGATCCTGGCTCGCCGCAACCTCCA 68 Query 8404 CCTCCC-GGGTTCAAGCT--ATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGG 8460 |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 69 CCTCCCTGGGTTCAAGCTGTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGG 128 Query 8461 CAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGT 8520 || ||||||||||| ||||||||||||||||||| |||||| ||||||| ||| || Sbjct 129 CACCTGCCACCACGCCCGGCTAATTTTTGTATTTTTACTAGAGATGGGGTTTCGCCACGT 188 Query 8521 TGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATC 8558 ||||||| |||||||| |||||||| ||||| |||||| Sbjct 189 TGGCCAGCCTGGTCTCAAACTCCTGGCCTCAAGTGATC 226 >seq5276 Length=269 Score = 244 bits (270), Expect = 1e-59 Identities = 206/248 (83%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 8364 TGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATT 8423 ||||||||||||| | |||| |||||| ||||||||||||||| |||||||| ||| Sbjct 269 TGGAGTGCAGTGGTGT-ATCTTGGCTCACCGCAACCTCCGCCTCCTCAGTTCAAGCAATT 211 Query 8424 CTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAA 8483 || || || |||||||| | |||||||| | ||||| ||||||| || |||||| Sbjct 210 CTTCTCCC-CAGCCTCCCGCAGAGCTGGGACTGCAGGCGCCCACCACCACACCCAGCTAA 152 Query 8484 TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 8543 ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| Sbjct 151 TTTTTGTATTTTTAGTAGAGA-CGGGTTTCACCATGTTGGCCAGGACAGTCTCGATCTCC 93 Query 8544 TGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 8603 |||||||| ||||||||| |||| ||||||| |||||||||| |||||||| |||||| Sbjct 92 TGACCTCA--TGATCCACCCTCCTCAGCCTCCCGAAGTGCTGGGGTTACAGGCGTGAGCC 35 Query 8604 ACCGCGCC 8611 || | ||| Sbjct 34 ACTGTGCC 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521448653730400