Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 3e-26
>seq4
Length=2525909
Score = 134 bits (148), Expect = 3e-26
Identities = 304/453 (67%), Gaps = 8/453 (2%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| |||| || ||||||| | || || || || | || || || ||||
Sbjct 2286881 TTTGCCCAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTC 2286940
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| ||||||| |||||||| || || | ||||||||||| | || ||||||
Sbjct 2286941 GCCTCCATCTTCTGGCTGCGCAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAG 2287000
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351
| ||| || |||||||| || || || | | || | | || ||| || | ||
Sbjct 2287001 CTGATCTCGCGTGACGAGGGCCTGCA-CACCGACTTTGCCTGTCTGCTGTTCTCGCACCT 2287059
Query 230352 CCAGAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAA 230408
| ||||| | || | || | ||| | || ||||| || || || || | |
Sbjct 2287060 C---AACAACCGCCCCAGCAAGCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCAT 2287116
Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468
|| ||||||||| | || || | || ||| |||| | ||||||||||| || ||
Sbjct 2287117 TGAGAAGGAGTTCCTGACCGAGGCCCTGCCCTGTGGCCTCCTCGGCATGAACGCCGACCT 2287176
Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| |||||||| || ||||| ||||||||| | | || || || || |||| ||
Sbjct 2287177 CATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGAAACGAAAA 2287236
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
|| ||| | | | |||||||||| ||||||||| ||| ||||| || |||||
Sbjct 2287237 GGTCTACCGCGCCACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGAC 2287296
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621
|||||||||||| ||||| || | ||||| ||
Sbjct 2287297 CAACTTCTTCGAGAAGCGCGTGGGCGACTACCA 2287329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823837359560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |