Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 156 5e-33 >seq2 Length=3936381 Score = 156 bits (172), Expect = 5e-33 Identities = 503/777 (65%), Gaps = 58/777 (7%) Strand=Plus/Plus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || |||| ||||| ||||| || ||| ||| |||| ||| ||||| | ||||||||| Sbjct 849749 TATACCGACATCTTCATGGAAATAGCCTTGTGAGGGTTGTACCCCTCAATTGCAAAGTCC 849808 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGC----CTCAGG-ATCCTGAGCCTGGGAA 145651 || || | | |||| ||| || || |||| || | ||| | ||| |||| Sbjct 849809 TCAACCTTCCATCCATCAATG--CTACAGCCGCTCTCCTTTGCTATCTTCAGCAGCGGAA 849866 Query 145652 AGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCC-ACGTGGTTGAGGTAGACG 145710 | || || ||| | || | || | ||| | || | ||||| ||||| || Sbjct 849867 ACTCGCGAGG-CTCGCGCTCCAGTTGAACCTCAAGAGCAGAGATGTGGTCAAGGTACACA 849925 Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770 || ||||| |||| || || | | | || || | ||||| || | || | | Sbjct 849926 TGTGCGTCGCCCATAACATGCGTCAGGCTTCCAGGAACCAGGCCTGTTGCACGAGCAATC 849985 Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830 |||| || ||||| ||||| ||| ||||||||||| || ||||| |||||||| | | Sbjct 849986 ATGTGTGTAAGCAGAGAGTACGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTCGCAC 850045 Query 145831 GAGCGCTGGTACAGCTGGCAGGAGA------------GCT---CCCCGCCCGCC------ 145869 || || ||||| | ||||||| | ||| || ||||| || Sbjct 850046 GACCGTTGGTAGAACTGGCAGTGCAAATGGCCTTTGGGCTTTTCCTCGCCCTCCTTTGCG 850105 Query 145870 ------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGC 145917 |||||||||||| | | || || |||||||||||||| Sbjct 850106 CCGGGATATGAAACGTAGAACTGGGCAAACATATGACACGGCGGCAGGGCCATCTTCTTT 850165 Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGAT 145976 ||||| || |||||||| ||| | | | | | || | || | || || |||||| Sbjct 850166 AGGTCTGCGGGGTTCCACGCGCTCATTATAATGCGCC-GATCGTACGGATTGGTCTTGAG 850224 Query 145977 CTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC 146036 || || | || |||||||| || || | ||| ||| || || |||| ||| Sbjct 850225 CTTGTGGATGACCTCGGCTAGCTGGTCGACACCTTTGCCCGTGTAGTCCGTTTTGGCGTC 850284 Query 146037 CACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGG 146096 |||||| |||| || || || | ||| ||||| ||||| ||||| |||||||| ||| Sbjct 850285 TACGTACTCGGCGCCAAAATGGCGCCATTGGAAGCCGTACACGGGGCCCAGGTCTCCGAC 850344 Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 ||| | ||| || || || | | | |||| || ||||| || |||||| | |||||||| Sbjct 850345 CTCGCGGTGGCCGAGGCCCACGCTGTCGAGAAACTCCCGCGAGCCGTTGCCATCCCAGAT 850404 Query 146157 CTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC-----CGTGGACCCCCTGATGAACC 146209 ||||||||| |||| || ||| |||| || |||| | ||| |||||||| Sbjct 850405 CTTGACGCCAGCCTC----AG---TCAGTGGAATCGACGACGTGCAGCCCTCGATGAACC 850457 Query 146210 AGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||| ||||| ||| | | | | ||| || | ||| || || |||| ||||| Sbjct 850458 AGAGAAGCTCGGCGATAATAGCACGCGTGAAAACTCGCTTAGTAGTGAGCAAGGGGA 850514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076711488480