Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2 156 5e-33
>seq2
Length=3936381
Score = 156 bits (172), Expect = 5e-33
Identities = 503/777 (65%), Gaps = 58/777 (7%)
Strand=Plus/Plus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
|| |||| ||||| ||||| || ||| ||| |||| ||| ||||| | |||||||||
Sbjct 849749 TATACCGACATCTTCATGGAAATAGCCTTGTGAGGGTTGTACCCCTCAATTGCAAAGTCC 849808
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGC----CTCAGG-ATCCTGAGCCTGGGAA 145651
|| || | | |||| ||| || || |||| || | ||| | ||| ||||
Sbjct 849809 TCAACCTTCCATCCATCAATG--CTACAGCCGCTCTCCTTTGCTATCTTCAGCAGCGGAA 849866
Query 145652 AGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCC-ACGTGGTTGAGGTAGACG 145710
| || || ||| | || | || | ||| | || | ||||| ||||| ||
Sbjct 849867 ACTCGCGAGG-CTCGCGCTCCAGTTGAACCTCAAGAGCAGAGATGTGGTCAAGGTACACA 849925
Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770
|| ||||| |||| || || | | | || || | ||||| || | || | |
Sbjct 849926 TGTGCGTCGCCCATAACATGCGTCAGGCTTCCAGGAACCAGGCCTGTTGCACGAGCAATC 849985
Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830
|||| || ||||| ||||| ||| ||||||||||| || ||||| |||||||| | |
Sbjct 849986 ATGTGTGTAAGCAGAGAGTACGAGGCAATGTTGAAGGGTACACCCAGGCCCATGTCGCAC 850045
Query 145831 GAGCGCTGGTACAGCTGGCAGGAGA------------GCT---CCCCGCCCGCC------ 145869
|| || ||||| | ||||||| | ||| || ||||| ||
Sbjct 850046 GACCGTTGGTAGAACTGGCAGTGCAAATGGCCTTTGGGCTTTTCCTCGCCCTCCTTTGCG 850105
Query 145870 ------------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGC 145917
|||||||||||| | | || || ||||||||||||||
Sbjct 850106 CCGGGATATGAAACGTAGAACTGGGCAAACATATGACACGGCGGCAGGGCCATCTTCTTT 850165
Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGAT 145976
||||| || |||||||| ||| | | | | | || | || | || || ||||||
Sbjct 850166 AGGTCTGCGGGGTTCCACGCGCTCATTATAATGCGCC-GATCGTACGGATTGGTCTTGAG 850224
Query 145977 CTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC 146036
|| || | || |||||||| || || | ||| ||| || || |||| |||
Sbjct 850225 CTTGTGGATGACCTCGGCTAGCTGGTCGACACCTTTGCCCGTGTAGTCCGTTTTGGCGTC 850284
Query 146037 CACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGG 146096
|||||| |||| || || || | ||| ||||| ||||| ||||| |||||||| |||
Sbjct 850285 TACGTACTCGGCGCCAAAATGGCGCCATTGGAAGCCGTACACGGGGCCCAGGTCTCCGAC 850344
Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156
||| | ||| || || || | | | |||| || ||||| || |||||| | ||||||||
Sbjct 850345 CTCGCGGTGGCCGAGGCCCACGCTGTCGAGAAACTCCCGCGAGCCGTTGCCATCCCAGAT 850404
Query 146157 CTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC-----CGTGGACCCCCTGATGAACC 146209
||||||||| |||| || ||| |||| || |||| | ||| ||||||||
Sbjct 850405 CTTGACGCCAGCCTC----AG---TCAGTGGAATCGACGACGTGCAGCCCTCGATGAACC 850457
Query 146210 AGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|||| ||||| ||| | | | | ||| || | ||| || || |||| |||||
Sbjct 850458 AGAGAAGCTCGGCGATAATAGCACGCGTGAAAACTCGCTTAGTAGTGAGCAAGGGGA 850514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076711488480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |