Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 7e-15
>seq8
Length=1110981
Score = 96.9 bits (106), Expect = 7e-15
Identities = 245/366 (67%), Gaps = 14/366 (4%)
Strand=Plus/Minus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| || |||||| || || || || || | || ||||||
Sbjct 325302 TACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCCTACCTGCTTAAGCTCGACGGCAAG 325243
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
|| || || || ||||||||| | ||||| || || ||||| ||| || ||||
Sbjct 325242 ATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTTGCCGTCGGCATTTG---GGGTGAC 325186
Query 248938 ATAGAG-AGCGTG--CTCGAGACGTACACCGGAATGA-GTGAACGCTGGATGACACATGC 248993
| | | |||||| |||||||| |||| | ||| | | | | | | || |||||
Sbjct 325185 AATGTGGAGCGTGTTCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTT-ACCCATGC 325127
Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053
| || || |||||||||||||||||| | |||||| || |||||||| |
Sbjct 325126 GTCTCCCACTCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCTTCATGCTTTCTAGT 325067
Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAA 249110
| |||| | |||||| | || |||||||| || || || | |||| || |
Sbjct 325066 CGACATGAAGGACGACAGCATTGAGGGCATTTACGATACCCTCA---AGACTTGTGCTAT 325010
Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170
||| || || | || ||||| ||||||||| |||| | ||| || || | || ||
Sbjct 325009 GATCTCCAAGATGGCTGGCGGCATCGGTCTCAACGTCCACCGCATTCGTGCCACTGGCTC 324950
Query 249171 GTACAT 249176
|||||
Sbjct 324949 CTACAT 324944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766234908416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |