Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq8 394 8e-105
seq4 241 1e-58
seq10 102 7e-17
seq3 102 7e-17
>seq8
Length=1110981
Score = 394 bits (436), Expect = 8e-105
Identities = 1235/1896 (65%), Gaps = 32/1896 (2%)
Strand=Plus/Plus
Query 22099 GGCGGTCTTGTCCACTGTAAACTGTATGG---CGTTTGCGGCCGGTTTGGTGCGAAGATA 22155
||| | || |||||| |||||||| || | || || ||| || || || || ||
Sbjct 323458 GGCCGCCTGGTCCACCGTAAACTGGATAGGAGCGGCAGCAGCCTGT---GTACGCAGGTA 323514
Query 22156 ATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCC 22215
|||||||| ||||| ||||||| |||||| | |||||| || || | || ||
Sbjct 323515 GTACATGCCAGTCTTAAGACCCAGCTTCCAGCCTGCAAAATGCATGCTGGTGATCTTACC 323574
Query 22216 ATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCG 22275
| || | ||||| | ||||| ||||| ||| || ||||| || || ||
Sbjct 323575 CATGGTGGGGTCCTTCATGTGAATATTGAGGGACTGGGACTGGTCAATAAAGGCACCGCG 323634
Query 22276 ATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTG 22335
||||| ||||| | | | |||||| ||| |||||||| || |||||||| ||
Sbjct 323635 GTCGGCAGCCATCTGAACAACCGTACGCTGCGAAATTTCCCACACCGTCTTGTATAGCGC 323694
Query 22336 CCTGATCTCTAACGGTATCGATTC-GATCCTCTGGACGGACCCGTTATTGTGTATGATCA 22394
| |||| || || || | | | ||| | |||| ||| ||||| | | ||||||
Sbjct 323695 CTTGATATCCGTGGGAAT-GCTGCTGATATTTTGGATGGAGCCGTTGTCGGCAATGATCC 323753
Query 22395 AATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGT 22454
|| || || |||| ||||| || | | || | || | ||| | |||
Sbjct 323754 GGTTCTTCATGTTATCAGACCACAGGCCAAGGTCGACAAGGTCGCGCAGCAGCCAAGGGT 323813
Query 22455 TCACCACTTGAAACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513
| || || || |||||||||| ||||| | ||||| |||||||||||||| ||| | ||
Sbjct 323814 TGACAACCTGGAACTCGCCGG-CAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872
Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573
|| || | || ||||| ||||| ||||| | || || || ||||| || || | |
Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932
Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCAC 22633
|| || ||||| | | ||||||| ||| || |||||| | |||||||||
Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAA 323992
Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCG 22691
|||||| |||||||||| ||||||| || |||||| | ||| |||| | ||
Sbjct 323993 AGATCGCTGGGCGTCACAT---CCCACATGTCAAATTGCAGGATGCCCTGCGAGAC--CG 324047
Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751
| ||| || || || ||| | || | || ||||| || ||| ||
Sbjct 324048 GCGAGCCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTCA 324107
Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATT--CG-GCGGCGGCGACGC 22808
||| ||| || || ||||| || || | |||||||| | || || ||| || |
Sbjct 324108 GCGCAGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCTCGG-GAGAC 324166
Query 22809 TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGA 22868
| | | ||||| |||| || ||| || || |||| |||||| || || | ||| |
Sbjct 324167 T--CAAAAGGCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAA 324224
Query 22869 TCGGTCGGTTTTTCAGATTCGACACTTTT--GCCTCGGGCAAAGGATACCAATTCGAATC 22926
|||| |||| || || | || | ||||| | | ||| || ||| |||
Sbjct 324225 TCGGGCGGTGGCGCATGTTG--CTGTTGTAGGCCTCCGTGACAGGGTAGTGGTTCACATC 324282
Query 22927 GATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTC 22986
|| | | ||||| ||| | | || | | || | |||||||
Sbjct 324283 AATGATGCGGTTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTC 324342
Query 22987 GTAAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATAC 23043
||| ||||| ||||| ||||||| | | ||| | ||||| || ||||| ||
Sbjct 324343 GTACTCGCCCTTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACAC 324402
Query 23044 GGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTAT 23103
|| ||||| || || |||||| | ||| || || || || ||| | ||
Sbjct 324403 AGCAACCTCATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAAT 324462
Query 23104 CGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163
|| |||| || |||||||||| || || ||||| |||||||| ||||| | ||
Sbjct 324463 GGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGG 324522
Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAACAC 23222
|||| |||||| ||| | ||| | || || ||||| ||||||| | || ||
Sbjct 324523 ATTGCCAGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAAC 324582
Query 23223 GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
|| || |||||| | |||||||||| ||||| || ||||| || | ||||
Sbjct 324583 CATGCGGCCACG-GCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGT 324641
Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342
| ||||| ||||||||||| | | | || ||||| ||| |||| || || |
Sbjct 324642 AGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCT 324701
Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402
|||| || |||| || || || ||||| ||||| ||||| |||||||| || |
Sbjct 324702 CAACACGCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAA 324761
Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462
|||| || || || |||||| || || | || || |||||||| || ||||| |
Sbjct 324762 CCTCTTCCTTTCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGG 324821
Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522
| || ||||| | ||||| || || || | ||| ||||| ||||| || || || ||||
Sbjct 324822 GTTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGG 324881
Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582
||||||||||| | || | | ||| || || | ||||||||| | ||| ||| |
Sbjct 324882 CCGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGG 324941
Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642
| | || || | || |||| | ||| |||| || ||| ||||| || || |
Sbjct 324942 CAATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCATCT 325001
Query 23643 TCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGG 23702
| || ||||| || || || || || ||||| |||||||| |||||||| || ||
Sbjct 325002 TGGAGATCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCA 325061
Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762
| |||| | || || ||||||| || || | || ||| |||| ||| || || |
Sbjct 325062 TGTCGACTAGAAAGCATGAAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGG 325121
Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822
| || || |||||| | ||||||| || ||||| || |||| | || |
Sbjct 325122 GAGACGCATGGGTAAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGAACACGCTCCA 325181
Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882
| || || || |||| ||| || ||||| ||||||| || || | ||||||
Sbjct 325182 CATTGTCACCCCAAATGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAA 325241
Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942
| ||||| | || | ||| || || || | || || || || ||||| || | |
Sbjct 325242 TCTTGCCGTCGAGCTTAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGT 325301
Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|||| |||||||| |||| ||| ||||| |||| ||
Sbjct 325302 AGTTGAAGTCACGGTCGTACACAATGGCAGAATCCA 325337
>seq4
Length=2525909
Score = 241 bits (266), Expect = 1e-58
Identities = 589/872 (68%), Gaps = 33/872 (4%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||| | ||| ||| | ||||||
Sbjct 2286485 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAAATTGACCTG 2286544
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATC-TGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || | || || ||| | || ||
Sbjct 2286545 TCCAAGGACCTTCACGACTGGAACAACCGCCTGAACAAGGATGAACAGTACTTCATCTCG 2286604
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||| | | || || |||||||||||||| || || || |||||||| | ||||| |
Sbjct 2286605 CACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGAGAACCTCGTCGAGCGT 2286664
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || || || || | | ||||| | ||||| ||||| || || | ||
Sbjct 2286665 TTCTCCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 2286724
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864
|| ||| | || || || | ||| ||||| || ||||| || ||| | ||||| | ||
Sbjct 2286725 GAGAACATCCACTCCGAGACGTACTCGCTGCTGATCGACACTTACATCAAGGAGCCCTCG 2286784
Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCA 57923
| | | | || || |||||||| ||||| || || |||| | ||| | |||||
Sbjct 2286785 CAGCGCACC-TAC-CTCTTCAACGCCATCGATACCAT-CCCGTGCATCCGCCGCAAGGCC 2286841
Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980
|| ||| | |||| ||||| | || || || | || || ||| || | || ||
Sbjct 2286842 GACTGGGCCCTCAAGTGGATCAC---CGACAAGGAGTCGACCTTTGCCCAGCGCCTGGTC 2286898
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039
|| || ||||||||||| || || ||||| |||||| ||||| || | || || ||| |
Sbjct 2286899 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGC-GCTTTCGCCTCCATCTTCTGGCT 2286957
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
| || |||||||| ||||| |||||||| || ||||||| |||| ||||| |||||
Sbjct 2286958 GCGCAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGA 2287017
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159
||| || || || || ||||| || || ||| ||| ||| |||| ||||| | |
Sbjct 2287018 GGGCCTGCACACCGACTTTGCCTGTCTGCTGTTCTCGCAC---CTCAA-CAACCGCCCCA 2287073
Query 58160 GGATCGCA-----TCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
| | ||| || | | || |||||||| || |||| || || || ||||| |
Sbjct 2287074 GCA-AGCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCATTGAGAAGGAGTTCCTG 2287132
Query 58215 ACCGAAGCCCT-ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273
||||| ||||| || |||||| | ||||| |||||| || | ||| |||||||
Sbjct 2287133 ACCGAGGCCCTGCCCTGTGGCC-TCCTCGGCATGAACGCCGACCTCATGAAGCAGTACAT 2287191
Query 58274 TGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACG 58331
|||||| || |||||| | || | ||| || || || | ||| ||| | |
Sbjct 2287192 TGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGAAACGAAAAGGTC--TACCGCGCC 2287249
Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaa 58391
| || || ||||| |||||| | |||||||||| |||||||| ||||| |||||
Sbjct 2287250 ACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAG 2287309
Query 58392 aaaaaaGTTAGCGAATATCAAAAATACGGCGT 58423
|| || |||| || ||||| ||||||
Sbjct 2287310 AAGCGCGTGGGCGACTACCAAAAGGCCGGCGT 2287341
>seq10
Length=988720
Score = 102 bits (112), Expect = 7e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||| ||| |||| ||||| |
Sbjct 887339 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 887280
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 887279 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 887220
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
|||||||| || || |||||||| || ||| |||| |||
Sbjct 887219 CAGCAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGAC 887181
>seq3
Length=3916844
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| || || || ||||| |||| || || | |||
Sbjct 1905435 ATGCAAATCTTCGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAAGTCGAGTCTTCC 1905376
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 1905375 GACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1905316
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || ||||| || ||| | || || || | ||| || |||
Sbjct 1905315 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAAC 1905256
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || ||||| ||||| || || | ||| | || ||||
Sbjct 1905255 ATTCAAAAGGAGTCCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGGTA 1905207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766333135040
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