Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 8e-11 >seq3 Length=3916844 Score = 82.4 bits (90), Expect = 8e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| || ||| | || | || || ||||| || ||| Sbjct 1905467 GTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCAAGCTGCTTTCCA 1905526 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| ||||||| || ||||| || ||||| ||||| || ||||| ||| || || Sbjct 1905527 GCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1905586 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCA 139742 | | || | ||||||| | |||||||||| ||| | ||||||||||||| Sbjct 1905587 ACATTGTCGATCGTGTCGGAAGTTTCCACCTCAAGGGTGATGGTCTTGCCGGTCA 1905641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063925590400