Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 2e-19
>seq4
Length=2525909
Score = 111 bits (122), Expect = 2e-19
Identities = 254/381 (67%), Gaps = 11/381 (3%)
Strand=Plus/Minus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || ||| || || ||| |||||| |||||||| | || || ||||||||
Sbjct 2287050 AACAGCAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAG 2286991
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || || ||||| ||||| ||||| ||||| || ||||| || || | ||
Sbjct 2286990 AAGGTCAGGCCAGGCATGAGGCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCC 2286931
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|| |||||||| || || || ||||||||||| || || | || || | | | |
Sbjct 2286930 GAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTGGGCAAAGGTCGACTCC 2286871
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187
|||| |||||||| | ||||| |||||||| | || || || || ||
Sbjct 2286870 TTGTCGGTGATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCG 2286811
Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAA 50243
||||| || ||||| ||| | | | | | || || | ||||| |||||||
Sbjct 2286810 ATGGCGTTGAAGAGGTAG----GTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAG 2286755
Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303
|| ||| | || || || ||||| || || ||||| || |||||||| || |
Sbjct 2286754 CAGCGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCG 2286695
Query 50304 AGCCTCGGTAATCTGCACTTC 50324
||||||| ||||| || ||
Sbjct 2286694 GGCCTCGGGGATCTGGACCTC 2286674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268692259680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |