Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-19 >seq4 Length=2525909 Score = 111 bits (122), Expect = 2e-19 Identities = 254/381 (67%), Gaps = 11/381 (3%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| || || ||| |||||| |||||||| | || || |||||||| Sbjct 2287050 AACAGCAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAG 2286991 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| ||||| ||||| ||||| || ||||| || || | || Sbjct 2286990 AAGGTCAGGCCAGGCATGAGGCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCC 2286931 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || ||||||||||| || || | || || | | | | Sbjct 2286930 GAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTGGGCAAAGGTCGACTCC 2286871 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| |||||||| | ||||| |||||||| | || || || || || Sbjct 2286870 TTGTCGGTGATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTATCG 2286811 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAA 50243 ||||| || ||||| ||| | | | | | || || | ||||| ||||||| Sbjct 2286810 ATGGCGTTGAAGAGGTAG----GTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAG 2286755 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 || ||| | || || || ||||| || || ||||| || |||||||| || | Sbjct 2286754 CAGCGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCG 2286695 Query 50304 AGCCTCGGTAATCTGCACTTC 50324 ||||||| ||||| || || Sbjct 2286694 GGCCTCGGGGATCTGGACCTC 2286674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268692259680