Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq7 109 5e-19 >seq7 Length=1169112 Score = 109 bits (120), Expect = 5e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || || | ||| |||| ||| ||||| |||||| || | ||| ||||| Sbjct 395802 AGCTGGGCAATGCGGTCGCCCTCCTTGACCTCGAAGTCGGCGTCGTGGTGGTTGAACAGG 395861 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 | |||| ||| | ||| |||||||| ||||||| || |||||||| |||||| ||| Sbjct 395862 AGCACCTTGACTTCGCCGCGGTAGTCGGCGTCGATGACACCAGCGCCGGTGTCGATGAAG 395921 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 || ||| | ||||||||||| || || || ||||| |||| Sbjct 395922 TGCTTGGCGGCAAGGCCGGAGCGGGGAGCGATGCGGCCGT 395961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447750332837440