Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq7 147 2e-30 >seq7 Length=1169112 Score = 147 bits (162), Expect = 2e-30 Identities = 186/253 (74%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561 |||| ||| ||||| ||||| ||||| | | | || || ||| |||||||| Sbjct 395710 CGCCAGTGCTGCCGAAGCCGCCAGCGCCACGGACGCTGTCCTCGAGGACAGCCACCTCGA 395769 Query 5562 CCACATCGGGGAACGCAGCGCGCTCGCAGATCA-GCTGCGCTATTCGGTCGCCCGTCTTT 5620 | ||||| || | | |||||| ||| || |||| || || ||||||||| ||| Sbjct 395770 CAACATCAGGAGTCACGATGCGCTC-CAGCACAAGCTGGGCAATGCGGTCGCCCTCCTTG 395828 Query 5621 ACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680 |||||||| ||| || | | ||||||||| | ||| || | ||||||||||||| Sbjct 395829 ACCTCGAAGTCGGCGTCGTGGTGGTTGAACAGGAGCACCTTGACTTCGCCGCGGTAGTCG 395888 Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740 ||||| || || || ||||| |||||||||||||||| | || ||||||||||||||| Sbjct 395889 GCGTCGATGACACCAGCGCCGGTGTCGATGAAGTGCTTGGCGGCAAGGCCGGAGCGGGGA 395948 Query 5741 GCCACGCGGCCGT 5753 || | |||||||| Sbjct 395949 GCGATGCGGCCGT 395961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054337104544