Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 347 3e-90 >seq8 Length=1110981 Score = 347 bits (384), Expect = 3e-90 Identities = 1037/1585 (65%), Gaps = 40/1585 (3%) Strand=Plus/Minus Query 363595 CAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGAC 363654 ||| ||||||| |||||||| | | ||||||||||| ||| ||||| || | || Sbjct 325089 CAGCTGTCTTCATGCTTTCTAGTCGACATGAAGGACGACAGCATTGAGGGCATTTACGAT 325030 Query 363655 ACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCA 363713 || || |||| ||||||| | || ||||||| || ||||| || ||| | | || |||| Sbjct 325029 ACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCTGGCGGCATCGGTCTCAACG-TCCA 324971 Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGG 363772 | ||||||| || | | |||||| |||||| || ||| || || | | Sbjct 324970 CCGCATTCGTGCCACTGG-CTCCTACATTGCCGGCACCAACGGTACCTCCAACGGTATTG 324912 Query 363773 TTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGC 363832 |||| ||| | ||||| || |||| || || | || || ||||||||||| |||| Sbjct 324911 TTCCTATGTTGCGTGTCTTCAACAACACGGCCCGCTATGTTGACCAGGGTGGCAACAAGC 324852 Query 363833 GCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTG 363892 | || || |||||||| || || || || || ||||| | |||||||| |||| Sbjct 324851 GGCCCGGTGCCTTTGCTATATACCTGGAACCCTGGCACGCCGACGTGTTTGAGTTCCTTG 324792 Query 363893 AGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTT 363952 | || || || ||| ||||| || || | ||||| || || ||||| || || | Sbjct 324791 ACCTGCGCAAGAACCATGGAAAGGAAGAGGTTCGTGCCCGCGACTTGTTCCTGGCTCTGT 324732 Query 363953 GGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTG 364010 || | | |||| || |||||||| || ||| | | | || | ||| | || | || Sbjct 324731 GGATCTGCGACCTGTTCATGAAGCGTGTTGAG--AAGAACGAGGACTGGACTCTGATGTG 324674 Query 364011 CCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGA 364070 ||| |||| || || || || | || | || || || | || ||||| ||||| Sbjct 324673 CCCCAACGAGTGCCCCGGCCTGGCTGACTGCTACGGCGATGAGTTTGAAGCTCTGTACGA 324614 Query 364071 AAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGC 364130 |||||| ||| ||| || | || | | || || |||||||| |||| || Sbjct 324613 AAAGTACGAAAAGGAAGGCCGTGGCCGCATGGTTATCAAAGCTCAGAAGCTGTGGTACGC 324554 Query 364131 CATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAA 364190 ||| |||| | |||| ||||| || | |||| |||| | ||||| || ||||| Sbjct 324553 CATTCTGGAGGCCCAGACCGAGACTGGCAATCCCTTTATGCTTTACAAGGACAGCTGCAA 324494 Query 364191 CCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGA 364249 ||||||| ||||||| || |||| ||||| |||| |||| |||||| || || |||| Sbjct 324493 CCGCAAGAGCAACCAGAAGAACCTGGGTACCATTC-GCAGCTCCAACCTGTGCACTGAGA 324435 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309 |||| || ||| || ||||| ||| ||| || || ||||| || || | || || | Sbjct 324434 TTATCGAGTACTGTGCCCCCGATGAGGTTGCTGTGTGCAACCTGGCCTCTCTTGCCCTGC 324375 Query 364310 CGGCGTTTG-----TAAAAGATGG--------TACTTTTGACCACCAGCATCTTTATGAC 364356 | | |||| || || | || ||||| || | ||| |||| Sbjct 324374 CCTCATTTGTTGACTACAACAAGGGCGAGTACGACTTTGGA-------AAGCTTCATGAA 324322 Query 364357 GTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAA 364414 || || | || | | | |||| || || | || || ||| | || || Sbjct 324321 GTCACACAGGTCGTTGTCC--GCAACCTGAACCGCATCATTGATGTGAACCACTACCCTG 324264 Query 364415 TTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCC 364474 | | || ||| | || ||||| || |||||||||||| | ||||| ||||| | Sbjct 324263 TCACGGAGGCCTACAACAGCAACATGCGCCACCGCCCGATTGGTGTCGGTGTCCAGGGTC 324204 Query 364475 TCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAA 364534 | ||||| | || || || ||| | ||||| || || || |||||| || | Sbjct 324203 TGGCTGATGCCTTCCTGGCTCTGCGCATGCCTTTTGAGTCTCCCGAGGCTCGTCAGCTGA 324144 Query 364535 ATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAA 364594 | ||| |||| ||||| || || || || || |||| || || || | || Sbjct 324143 ACAAGCAGATTTTTGAGACCATCTACCACGCTGCGCTGACGGCCTCAATGGAGATTGCCC 324084 Query 364595 AAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGT 364654 | || |||| | ||||||||||||||||| || || | |||||||| | | || | Sbjct 324083 AGACTGAGGGCACATACTCTACTTATGAGGGCTCGCCGGTCTCGCAGGGCATCCTGCAAT 324024 Query 364655 TTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACG 364714 |||| | ||| |||| ||||| | | ||| ||||| | | || || Sbjct 324023 TTGACATGTGGGATGTGACGCCCAGCGATCTTTGGGACTGGACTTCCCTCAAGGAGAAGA 323964 Query 364715 TTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTG 364774 ||||| |||| ||| |||||||| ||| | || ||||||||||| || ||| Sbjct 323963 TTAAGCAGCACGGTGTCCGCAACTCTCTCCTGGTTGCACCCATGCCCACTGCCAGTACGT 323904 Query 364775 CACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCC 364834 | |||||||| || |||||||||||||| || || | || ||| |||| |||| Sbjct 323903 CGCAGATCCTGGGTAACAACGAGTGCTTTGAGCCCTACACTTCCAACATTTACCAGCGCC 323844 Query 364835 GGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACC 364894 | |||||| |||| || || | ||| || || | || | || ||| ||||| Sbjct 323843 GTGTTCTTGCCGGCGAGTTCCAGGTTGTCAACCCTTGGCTGCTGCGCGACCTTGTCGACC 323784 Query 364895 GCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGA 364954 || |||||| ||| | |||||||||| ||||| |||| || || || | || | Sbjct 323783 TTGGCCTGTGGTCTGATAACATGAAGAACCGGATCATTGCCGACAACGGCTCCATCCAAA 323724 Query 364955 ACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCC 365013 | || ||| ||| ||| ||| | ||| | | ||||| || || ||||||||||| Sbjct 323723 ATATCAGCAGCATTCCCA-CGGATATCAAGGCGCTATACAAGACGGTGTGGGAAATTTCG 323665 Query 365014 ATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073 ||| || | || | ||||| ||||| |||||||| ||||| ||| |||||| Sbjct 323664 CAGCGTACGGTTGTTCAGATGGCTGCCGACCGCGGTGCCTTTATTGACCAGTCCCAGTCC 323605 Query 365074 TTTAACGTATT--CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACG 365131 | || |||| ||||| | || ||| | ||| | || ||||||||| | Sbjct 323604 CTCAA--TATTCACATGAAGGACCCCACCATGGGTAAGATCACCAGCATGCATTTTGCAG 323547 Query 365132 GGTGGAAATCCGGTCTTAAGACAGG 365156 | ||||| ||||||||||| || Sbjct 323546 GCTGGAAGCTGGGTCTTAAGACTGG 323522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353399609384