Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4 179 3e-40 seq8 165 8e-36 seq3 125 7e-24 seq10 113 4e-20 >seq4 Length=2525909 Score = 179 bits (198), Expect = 3e-40 Identities = 359/520 (69%), Gaps = 19/520 (4%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | ||| || |||||||||| | |||||||||| | || || Sbjct 2286818 ATCCCGTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATCACCGACAAGGAGTCG 2286877 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || || ||| |||| |||| |||||||| || |||||| |||| || || ||| | Sbjct 2286878 ACCTTTGCCCAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCT 2286937 Query 46204 TTTGCCGCCATCTTTTACAT-CAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 || ||| ||||||| | | | || | || | ||||||| |||||||| || ||| Sbjct 2286938 TTCGCCTCCATCTTCTGGCTGCGCAAGCGCGGCC-TCATGCCTGGCCTGACCTTCTCCAA 2286996 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 ||||||||| ||||| |||||||||||||| || |||||||| || ||| || | | Sbjct 2286997 CGAGCTGATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTG--TCTGCTGT---TC 2287051 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCG---ACACCGTGCTGAGC--ATGTTCAAGGAGGCG 46377 |||| | | |||| | || || | || | | |||| || ||| || || Sbjct 2287052 TCGC-ACCTCAACAACC--GCCCCAGCAAGCAGCTAGTCGAGCAGATCATCACCGATGCT 2287108 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 || | ||||||||||||||| | || | || |||||| || ||| || ||||||||| Sbjct 2287109 GTCGTCATTGAGAAGGAGTTCCTGACCGAGGCCCTGCCCTGTGGCCTCCTCGGCATGAAC 2287168 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 || | ||| | ||||| ||||| || || ||||| |||||||| | | || Sbjct 2287169 GCCGACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGT-CGCCCTC-G 2287226 Query 46498 CAGCCGAAGCATTTTCACGCGC--GCAATCCATTTGAGTTTATGAACAACATCTCCCTGG 46555 | |||| | | ||||| ||| || ||||| |||||| | |||||||| || | Sbjct 2287227 GAAACGAAAAGGTCTACCGCGCCACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCG 2287286 Query 46556 AGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || ||||| |||||||| ||||| || Sbjct 2287287 GCGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGACTA 2287326 >seq8 Length=1110981 Score = 165 bits (182), Expect = 8e-36 Identities = 953/1499 (64%), Gaps = 39/1499 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | ||||| ||| || | ||| || ||| |||| Sbjct 323813 TTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 323872 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| || |||||||| || | || | || ||||||||| || ||| Sbjct 323873 TCAAAGCACTCGTTGTTACCCAGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACC 323932 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| ||| || | ||||| || | | ||| ||||| Sbjct 323933 AGGAGAGAGTTGCGGACACCGTGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAA 323992 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | ||| |||| ||||||||||| | |||| ||||||| | | || | Sbjct 323993 AGATCGCTGGGCGTCACATCCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGAG 324052 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | | | | ||| ||||| ||| | ||| | ||| ||| ||| || Sbjct 324053 CCCTCATAAGTAGAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTCAGCGCA 324112 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || || || ||||| ||| ||| |||| ||| | || || ||| | Sbjct 324113 GCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAA 324172 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 ||||||||||| | || ||||| || || ||||| | || || || || || || Sbjct 324173 GGCATGCGCAGAGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATCGGGCGG 324232 Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537 || ||||||||| | ||| | || ||| || | || || || || Sbjct 324233 TGGCGCATGTTGCTGTTGTAGGCCTCCGTGACAGGGTAGTGGTTCACATCAATGATGCGG 324292 Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCC 145597 |||| ||| || || || |||| ||| | | | | |||| ||||||| || || Sbjct 324293 TTCAGGTTGCGGACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCGTACTCGCCC 324352 Query 145598 TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCC 145657 | || | | ||| | | ||| | || |||| || || || || ||| Sbjct 324353 TTGTTGTAGTCAACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTCA 324412 Query 145658 TCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 |||| | | | ||| | | ||||| | ||||| ||| | ||||| ||||| Sbjct 324413 TCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGG 324472 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 || | ||| || || || | |||||| ||||||||| ||||| | || ||||||| Sbjct 324473 TTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGTC 324532 Query 145778 TCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGC-TGCTGG 145834 || ||| | ||||| || | || || || | ||| || | | ||| || Sbjct 324533 TCGGTCTGGGCCTCCA-GA-ATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGC-GG 324589 Query 145835 TAGCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAAT 145892 ||||| || | |||||| |||| | |||||| |||||| | |||||||| | Sbjct 324590 CCACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCT--TCAAACTCATCGCCGTAGCAGT 324647 Query 145893 CGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGC 145952 | | ||||||||| |||| |||||| |||||||| | ||| | |||| | || | Sbjct 324648 CAGCCAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACAC 324707 Query 145953 GCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCT 146012 ||| ||| |||| || | |||||| || | ||||||||| || | | ||| Sbjct 324708 GCTTCATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGC---ACGAACCT 324764 Query 146013 CAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCACGG 146067 | | ||||| ||| || || | ||| | ||| | | | ||| |||||||| || Sbjct 324765 CTTCCTTTCCATGGTTCTTGC-GCAGGTCAAGGA-ACTCAAACACGTCGGCGTGCCAGGG 324822 Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124 ||| | || | || | ||| || || |||||||||||||| || | || | Sbjct 324823 TTCCAGGTATATAGCAAAGGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGC 324882 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184 | ||||||| ||||| |||| ||| || | | ||| ||| ||||| || | Sbjct 324883 CGTGTTGTTGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGC 324942 Query 146185 TATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTACT 146243 || || ||| || || | || || || || | |||| ||||| ||| | || Sbjct 324943 AATGTAGGAGCCAGTGGCACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCAT-CT 325001 Query 146244 TGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--CTTC 146300 |||| || || | |||| ||| || ||||| ||||| |||||||| ||| |||| Sbjct 325002 TGGAGATCATAGCACAAGTC-TTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTC 325060 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360 ||| ||| |||||||| || ||| ||| ||| || || || || ||| | | Sbjct 325061 --ATGTCGACTAGAAAGCATGAAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAG 325118 Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCGATAGCGT 146417 | || ||| || ||||| | || |||| ||| | || || |||| | | Sbjct 325119 TGGGAGACGCATGGGTAAAGAACTT---GCTCGACATGAGGTTGTAAGTCTCGAGAACAC 325175 Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 | | | ||| || |||||| | || || ||||| | |||||| ||||| |||| Sbjct 325176 GCTCCACATTGTCACCCCAAATGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCT 325235 Query 146478 CCGCCA-CTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAA 146535 | | | |||| ||| | ||| | || ||| | ||||||||| ||| | || || Sbjct 325236 CGACAATCTTG-CCGTCGAGCTTAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAA 325293 Score = 125 bits (138), Expect = 7e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | || | ||| |||||||| || |||||||| ||| | Sbjct 478883 CCACCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 478942 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | |||||||||||||| || Sbjct 478943 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 479002 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 479003 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 479062 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 || | ||||| ||| ||||| || || || || |||||| Sbjct 479063 TCTAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 479101 >seq3 Length=3916844 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | ||| | || |||||||||||||||||||| ||| Sbjct 1905209 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAA 1905268 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || || |||| | |||||||||||||| ||| Sbjct 1905269 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1905328 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 1905329 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACT 1905388 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| || ||||| Sbjct 1905389 TCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||| || | ||| | || || ||||| || |||||||| || Sbjct 1904923 GCCTCCACGCAGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGA 1904982 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| | || | ||||||||||||||| || Sbjct 1904983 GAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGG 1905042 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | ||||| | |||||||| Sbjct 1905043 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCAGAGGACTCGAC 1905102 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| || | ||| || || || || || || |||| Sbjct 1905103 TTCGAGAGTTATGGTCTTTCCAGTCAGGGTCTTGACGA 1905140 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || ||||| || || |||||||| ||| Sbjct 1905437 CCACCACGGAGACGGAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 1905496 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || || |||| | |||||||||||||||||| Sbjct 1905497 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 1905556 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1905557 ATGCCCTCCTTGTC 1905570 >seq10 Length=988720 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| || || |||||| |||||| |||||||| || ||| ||| Sbjct 887147 CCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGA 887206 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| || || ||||| | | Sbjct 887207 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 887266 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 887267 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 887326 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 887327 AAATCTGCAT 887336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012729198080