Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2 104 3e-17 >seq2 Length=3936381 Score = 104 bits (114), Expect = 3e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113 ||||||||||||||||| ||| || | |||||||| ||| || ||| | || Sbjct 3220539 AGATTGGCGACAAGTTTGCGTCTCGTCACGGTCAAAAGGGTACGATTGGTGTGACGTACC 3220480 Query 15114 CCCAGGAAGACATGCCCTTTACCGCGTCAGG-CATGACGCCCGACATTATCATCAACCCC 15172 || ||||||||||| ||||| ||| ||| ||| ||||||||||| |||||||||||| Sbjct 3220479 GTCAAGAAGACATGCCGTTTAC-GCGCGAGGGCATCACGCCCGACATCATCATCAACCCC 3220421 Query 15173 AACTGCATCCCGTCCCGCATGACCAT 15198 || ||| ||||| || |||||||| Sbjct 3220420 CACGCCATTCCGTCTCGTATGACCAT 3220395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391908291200