Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 188 1e-42 seq8 154 3e-32 seq3 152 9e-32 seq6 145 1e-29 seq10 132 9e-26 >seq4 Length=2525909 Score = 188 bits (208), Expect = 1e-42 Identities = 566/866 (65%), Gaps = 31/866 (4%) Strand=Plus/Minus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 |||||| ||||| ||||| || || || |||||||||||||| |||||| |||| Sbjct 2287342 GACGCCGGCCTTTTGGTAGTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAG 2287283 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||| |||||||||||||| ||||| | ||| || ||||| Sbjct 2287282 CGAGATGTTCTCCATAAAGTCAAAGGGGTTGGTGGCGCGGTAGACCTTTTCGTTTCCGAG 2287223 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 || || | |||||| || |||||||| |||||||| |||| ||||| | |||||| Sbjct 2287222 GGCGACGAGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTCGGCGTTCAT 2287163 Query 10118 GCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 ||| | | || ||||| | ||| ||| | ||| ||||| || || |||| || || Sbjct 2287162 GCCGAGGAGGCCACAGGGCAGGGCCTCGGTCAGGAACTCCTTCTCAATGACGACAGCATC 2287103 Query 10178 CTCGACGA--TGCTC--TTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 || || ||||| | | | | ||| | | ||||| ||| | ||| ||| Sbjct 2287102 GGTGATGATCTGCTCGACTAGCTGCTTGCTGGGGC-GGTTGTT---GAGGTGCGAGAACA 2287047 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || |||| | ||| ||||||||||| || ||| | ||||||||| || Sbjct 2287046 GCAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGG 2286987 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 ||| || |||||||| || || |||||||||||||| |||| | ||| | || |||| Sbjct 2286986 TCAGGCCAGGCATGAGGCCGCGCTTGCGCAGCCAGAAGATGGAGGCGAAAGCGCCCGAGA 2286927 Query 10354 ACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCG------ 10405 |||||| ||||| ||| | ||||||| ||||||| || |||| || Sbjct 2286926 --AGAAGATGCCCTCGACGGCGGCAAAGGCGACCAGGCGCTGGGCAAAGG-TCGACTCCT 2286870 Query 10406 -GTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCT 10464 |||| | | | || |||||| | ||||| | | | ||||| || | Sbjct 2286869 TGTCG---GTGATCCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCACGGGATGGTAT 2286813 Query 10465 CGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCA 10524 |||| || | |||||| | | | |||| | |||| || || || | |||| Sbjct 2286812 CGATGGCGTTGAAGAGGTAGGTGCGCTGCGAGGGCTCCTTGATGTAAGTGTCGATCAGCA 2286753 Query 10525 GGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTG 10584 | ||||| |||| ||||| | |||| | |||| | ||||||| || | Sbjct 2286752 GCGAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGG 2286693 Query 10585 CCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCAT 10644 || |||| | ||| || ||| || | | |||||||| | || ||||| | Sbjct 2286692 CCTCGGGGATCTGGACCTCGCCGGAGAAACGCTCGACGAGGTTCTCGTTGACGATGCCGT 2286633 Query 10645 CGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA--- 10701 || | || |||||| ||||||||||| |||||||| | ||||| | ||||| Sbjct 2286632 CGGATGCGGCGAAGAAGGCGAGGATGTGCGAGATGAAGTACTGTTCATCCTTGTTCAGGC 2286573 Query 10702 -GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAA 10760 ||| || |||||| | |||| | || | | ||||| | |||||||| Sbjct 2286572 GGTTGTT----CCAGTCGTGAAGGTCCTTGGACAGGTCAATTTCCTCGGCAGTCCAGAAG 2286517 Query 10761 GTGGCAACGGCCTTCTTGTACATCTG 10786 | || ||||||||||||||||||| Sbjct 2286516 GACGCCTCGGCCTTCTTGTACATCTG 2286491 >seq8 Length=1110981 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || |||||||| || |||||||| || ||||| Sbjct 478883 CCACCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 478942 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 478943 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 479002 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 479003 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 479062 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | ||| ||||| || ||||| |||||||||||||| Sbjct 479063 TCTAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 479100 Score = 98.7 bits (108), Expect = 2e-15 Identities = 182/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 30920 CTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGTCTTCATAGA 30979 ||| | |||||||| ||| | ||||||||| || || | | || || || | || Sbjct 323608 CTGGGACTGGTCAATAAAGGCACCGCGGTCGGCAGCCATCTGAACAACCGTACGCTGCGA 323667 Query 30980 CAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGCTCAGGGTGGATGCCAATGACACGTTG 31039 | ||||| | |||||||| | ||||||| || | | | |||| ||| | ||| Sbjct 323668 AATTTCCCACACCGTCTTGTATAGCGCCTTGATATCCGTGGGAATGCTGCTGATATTTTG 323727 Query 31040 GATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCACGTGCCACGAGC 31099 |||||| || || |||||| ||| ||||||||||| || |||||| |||| | | Sbjct 323728 GATGGAGCCGTTGTCGGCAATGATCCGGTTCTTCATGTTATCAGACCACAGGCCAAGGTC 323787 Query 31100 GATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGCAAGGGTCCGGCG 31159 || |||||||||| || | |||||| || ||||||| || ||||| ||||| Sbjct 323788 GACAAGGTCGCGCAGCAGCCAAGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCG 323847 Query 31160 GCTGTACAGATTAGAAGTGATCGGCTC 31186 ||| | || |||||| ||||| Sbjct 323848 CTGGTAAATGTTGGAAGTGTAGGGCTC 323874 >seq3 Length=3916844 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || || |||||||| ||||| ||||| || ||||| Sbjct 1905209 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAA 1905268 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || || Sbjct 1905269 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1905328 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || ||| Sbjct 1905329 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAAGACTCGACT 1905388 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| || |||||||||||||| || ||||| Sbjct 1905389 TCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 1905435 Score = 149 bits (164), Expect = 1e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| |||| || || || || || || |||||||| || || ||| Sbjct 1904924 CCTCCACGCAGACGCAGAACCAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAG 1904983 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || ||||| || || Sbjct 1904984 AGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGG 1905043 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||||||| || ||||| || | || || ||| Sbjct 1905044 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTATCAGAGGACTCGACT 1905103 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | || ||||| ||||| || ||||||||||||| Sbjct 1905104 TCGAGAGTTATGGTCTTTCCAGTCAGGGTCTTGACGA 1905140 Score = 116 bits (128), Expect = 7e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || ||||||||||| |||||||| || ||||| || || | ||||| || | |||| Sbjct 1905461 TGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCCTCAAGCTGC 1905520 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || || | || ||||| || || ||||| |||||||| || ||||| Sbjct 1905521 TTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 1905580 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 | |||||| ||||| ||||| | | ||| || || | ||||||||| || || || Sbjct 1905581 GACTTGACATTGTCGATCGTGTCGGAAGTTTCCACCTCAAGGGTGATGGTCTTGCCGGT 1905639 >seq6 Length=1530755 Score = 145 bits (160), Expect = 1e-29 Identities = 486/745 (65%), Gaps = 31/745 (4%) Strand=Plus/Minus Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326 |||||| | | |||||| ||||| |||||||| ||||| ||| || | | | Sbjct 1261845 CCTTGGTCTTCACACCCTCAAGGAAACCGGGCTCAGGGAAGGTGAACTCCATCTCGGAGG 1261786 Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTC 225386 | ||| ||||||||||| ||| || | ||| ||||| ||| |||||| | Sbjct 1261785 CACCCAGCTCGTAGTAAGACTTGGCCGAAGGGCACTTCTTGACGAACTCAGCCAGGTTAC 1261726 Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCG 225445 | ||| | | ||||||| || |||| || ||||| ||| | |||||| | Sbjct 1261725 CACGGTAACGCTTAAGCTTGAAACGCT---CGTAGTGGACAATGTGCTG-GCACACGTTG 1261670 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAG 225504 || |||||||||||||||||||||||||||||||| | || | | || | | || Sbjct 1261669 TCGAGGAAGCCAGAGTCGTGGGACACAATGATGGAAGTGCAGG---GAGAGTTGCAT-AG 1261614 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 || ||||| ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 1261613 GTAATCCTCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCCAGAAG 1261554 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 ||| || || | | | || || ||| || || | ||||||||| ||||| || || Sbjct 1261553 CAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCCAACCACC 1261494 Query 225625 GGACAGGGAGCCGATTGAAACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTCCAGGAGC 225682 ||| |||| | || | ||| || | | || ||| |||||| | || | |||| Sbjct 1261493 GGAAAGGGCGGAAATCTCACCAG--TGATCATCTGCTCGGTGAAGCCGAAGTCAATGAGC 1261436 Query 225683 GTCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGA----- 225737 || ||| | ||| | | | || | ||||||| ||| | | || Sbjct 1261435 TGCTTGATGACATTCTCCTTGGTGGT---AGTG---ACGTTGGCGTCAG-CTAGCTTCTT 1261383 Query 225738 ---GGT--AATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTA 225792 ||| | ||| |||||| || | ||| | ||| | |||||| || ||| | Sbjct 1261382 CATGGTCCAGTCAATGGTGGTCATCTCGGTATCAGCAGAGTCCAGGTCGTGCTCGACGAA 1261323 Query 225793 CACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACG 225852 || ||| || || || | ||||| ||||| | ||| | || || ||||| Sbjct 1261322 GACAGTCTTGACCTCGGACTGCTTAGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACG 1261263 Query 225853 GAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT 225912 | ||| ||| |||||| | |||||||||||| || ||||| | | || ||||| Sbjct 1261262 CATCAGAGTAGACTTGCCGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGACCACGCTT 1261203 Query 225913 GATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCA 225972 | | ||| | || ||| || || |||||| |||| |||||||||||||| ||| Sbjct 1261202 CAGGCGCAGGTGGGTCTGGTTAAGCAGAATCTTGGCACCGTAGGCAAGGGAGAAAGTGCA 1261143 Query 225973 ATCGCACAGGTCCTCACCCTCCTCG 225997 | |||||||||||||||||||||| Sbjct 1261142 GTTGCACAGGTCCTCACCCTCCTCG 1261118 >seq10 Length=988720 Score = 132 bits (146), Expect = 9e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || || || || | || || || | |||||| || ||||| || Sbjct 887149 TTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATC 887208 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| |||||||| | |||||| ||| Sbjct 887209 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 887268 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 || ||||| | || || || || | ||| || || || ||||| |||||||||||||| Sbjct 887269 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 887328 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 887329 ATCTGCAT 887336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622261756640