Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 437 2e-117 seq8 363 3e-95 >seq4 Length=2525909 Score = 437 bits (484), Expect = 2e-117 Identities = 625/860 (73%), Gaps = 30/860 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| |||||||| ||||||||| Sbjct 2286485 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAAATTGACCTG 2286544 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 |||||||| || |||| | || | |||| | | ||| ||| ||| || Sbjct 2286545 TCCAAGGACCTTCACGACTGGAACA-ACCGCCTGAACAAGGATGAACAGTACTTCATCTC 2286603 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || |||||||||||||| || |||||||| ||||| |||||||| | | | Sbjct 2286604 GCACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 2286663 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 2286664 TTTCTCCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 2286723 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| |||| | ||| || |||| |||||| ||| ||| | Sbjct 2286724 GGAGAACATCCACTCCGAGACGTACTCGCTGCTGATCGACACTTACATCAAGGAGCCC-T 2286782 Query 42596 CG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 || |||| | | || ||||| ||||| || || || || |||||| ||||| | Sbjct 2286783 CGCAGCGCACCTACCTCTTCAACGCCATCGATACCATCCCGTGCATCCGCCGCAAGGCCG 2286842 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCC 42713 ||||||| ||||| |||||| | | | | | | || || | | || | ||||| ||| Sbjct 2286843 ACTGGGCCCTCAAGTGGATC-ACCGACAAGGAGTCGACCTTTGCCCAGCGCCTGGTCGCC 2286901 Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT---C 42770 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 2286902 TTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTCGCCTCCATCTTCTGGCTGCGC 2286961 Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 |||| || || ||||| || || |||||||| ||||| || ||| | |||||| Sbjct 2286962 AAGC--GCGGCCTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAG 2287018 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCT 42888 || ||||| | ||||||||||| || ||||||||| ||||||| |||| |||| Sbjct 2287019 GGCCTGCACACCGACTTTGCCTGTCTGCTGTTCTCG---CACCTCA---ACAACCGCCCC 2287072 Query 42889 CG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947 | ||| ||| ||| | |||||||| || || || | || |||||||||||||| Sbjct 2287073 AGCAAGCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCATTGAGAAGGAGTTCCTG 2287132 Query 42948 ACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006 || || | |||||| ||| ||| ||||||||||| |||||||||| ||||||| Sbjct 2287133 ACCGAGGCCCTGCCCTGTG-GCCTCCTCGGCATGAACGCCGACCTCATGAAGCAGTACAT 2287191 Query 43007 CCAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064 ||| ||||||||||| || || || ||| | || | ||||| | | Sbjct 2287192 TGAGTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGAAACGAAAAGGTCTACCGCGCC 2287249 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 | |||||| ||||||||||||||||||||| | | |||||||||||||| |||||| Sbjct 2287250 ACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAG 2287309 Query 43125 AAGCGCGTCGCCGACTACCA 43144 |||||||| | ||||||||| Sbjct 2287310 AAGCGCGTGGGCGACTACCA 2287329 >seq8 Length=1110981 Score = 363 bits (402), Expect = 3e-95 Identities = 1141/1747 (65%), Gaps = 49/1747 (3%) Strand=Plus/Plus Query 243878 TTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG--GT 243935 |||||||||||| |||||| | |||| | || || || ||||| ||| | || Sbjct 323600 TTGAGGGACTGGGACTGGTCAATAAAGGCACCGCGGTCGGCAGCCATC-TGAACAACCGT 323658 Query 243936 CCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTT 243995 | ||| || || || || |||||||||| | | ||||| | | ||| || || Sbjct 323659 ACG-CTGCGAAATTTCCCACACCGTCTTGTATAGCGCCTTGATATCCGTGGG-AATGCTG 323716 Query 243996 C-GATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 | ||| || || | ||||| |||| | | |||| | || | ||||||||| |||| Sbjct 323717 CTGATATTTTGGATGGAGCCGTTGTCGGCAATGATCCGGTTCTTCATGTTATCAGACCAC 323776 Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCC 244111 ||||| ||| | || | | || ||| ||| ||| || ||||| ||||| || Sbjct 323777 AGGCC-AAGGTCGACAAGGTCGCG--CAGCAGCCAAGGGTTGACAACCTGGAACTCGCCG 323833 Query 244112 GACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171 | || || ||||||||||| | |||| || ||||| | || ||| |||| ||| Sbjct 323834 GCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCC 323893 Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231 || ||||||| ||| || ||||| |||||||| | ||||| ||| ||| | || ||| Sbjct 323894 AGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCG 323953 Query 244232 TGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291 ||| || || |||| |||||||||| | | || || | || | | Sbjct 323954 TGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAAA-GATCGCTGGG-CGTCACAT 324011 Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351 ||||||||||||| ||||| | |||| ||| || |||||| || || Sbjct 324012 -------CCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGAGCCCTCATAAGTA 324064 Query 244352 GGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGAT 244410 | ||| | || || |||||| | || | | |||| || || |||| |||||| Sbjct 324065 GAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTC-AGCGCAGCGTGGTAGAT 324123 Query 244411 GGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCAT 244470 |||||| || ||| |||||||| | || |||| | | || || |||| || Sbjct 324124 GGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAAGGCATGCGCAG 324183 Query 244471 CATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTT 244530 || |||| | || ||||| ||||| || |||| || || || | ||| ||| |||| Sbjct 324184 AGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTT 324243 Query 244531 GGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCG 244590 | | ||| || | || ||||| ||| | || || | ||| |||||||| Sbjct 324244 GCTGTTGTAGGCCTCCGTGACAGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCG 324303 Query 244591 GGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGC 244650 | | | | ||| || ||| ||||||||||||| ||| | Sbjct 324304 GACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCGTACTCGC------CCTTGTT 324357 Query 244651 GATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTC 244710 | | || | ||||| | ||||| | |||||||||||| || || ||||| Sbjct 324358 G-TAGTCA-----ACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTC 324411 Query 244711 CTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAG 244770 || | | ||||| || |||||| ||||| ||||| || ||||| ||||| Sbjct 324412 ATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 324471 Query 244771 GTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGT 244830 || || || ||| |||| ||||||| ||||||||| ||||| ||||| || || Sbjct 324472 GTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGT 324531 Query 244831 CTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGC 244890 |||| |||||| | || | | || ||| || | | ||| |||| | |||| | Sbjct 324532 CTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGCGGCC 324591 Query 244891 CTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTC 244950 ||| || ||||| |||||| || || ||||| ||| || || | Sbjct 324592 ACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTAGCAGTCAGC 324651 Query 244951 TAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTG 245010 |||||||||||| |||||||| ||| |||| || || | || || | || Sbjct 324652 CAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACACGCTT 324711 Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 |||||| |||||| |||||| || ||| |||| | ||| | || | ||| ||| Sbjct 324712 CATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTTCCTT 324771 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 ||| |||||| | ||| || | || ||||| |||||| |||||||||| |||| ||| Sbjct 324772 TCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTA 324831 Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGT 245189 | ||| | ||| ||||||||||||||||| |||||||| || | | || | || Sbjct 324832 TATAGCAAAGGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTG-TTGT 324890 Query 245190 TGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGG 245249 |||||| |||| |||| || || ||||| ||| ||||||||||| ||||||| Sbjct 324891 TGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGG 324950 Query 245250 CGCCCTTGCCCC---TGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGA 245306 ||| || | | || ||| | | || | || | ||||| || |||||||| Sbjct 324951 AGCCAGTGGCACGAATGCGGTGGACGTTG---AGACCGATGCCGCCAGCCATCTTGGAGA 325007 Query 245307 TGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGA 245366 | | || || |||||| ||| || |||||||| |||||||| |||||||| || Sbjct 325008 TCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGA 325067 Query 245367 GCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGG 245426 |||||||| || |||||||||| || ||| | | | |||||| |||||||| | Sbjct 325068 CTAGAAAGCATGAAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGGGAGACG 325127 Query 245427 CGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGT 245486 | ||||||||| | |||||| | || ||| |||| ||| | | || | |||| Sbjct 325128 CATGGGTAAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGAACACGCTCCACATTGT 325187 Query 245487 CGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCG---ATGGGTC 245543 | || || | ||| | ||| | |||||||||| |||| || | Sbjct 325188 CACCCCAAATGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 325247 Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGC 245603 | ||| | ||| |||| |||||||||||| || |||||||| ||||||||| |||| Sbjct 325248 CGTCGAG---CTTAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGT 325304 Query 245604 CAAAGTC 245610 ||||| Sbjct 325305 TGAAGTC 325311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339058349120