Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4 437 2e-117
seq8 363 3e-95
>seq4
Length=2525909
Score = 437 bits (484), Expect = 2e-117
Identities = 625/860 (73%), Gaps = 30/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||| |||||||||
Sbjct 2286485 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAAATTGACCTG 2286544
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
|||||||| || |||| | || | |||| | | ||| ||| ||| ||
Sbjct 2286545 TCCAAGGACCTTCACGACTGGAACA-ACCGCCTGAACAAGGATGAACAGTACTTCATCTC 2286603
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||||||||| || |||||||| ||||| |||||||| | | |
Sbjct 2286604 GCACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 2286663
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| ||||| ||| | ||||| ||||||||||||||||||||||| ||
Sbjct 2286664 TTTCTCCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 2286723
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| |||| | ||| || |||| |||||| ||| ||| |
Sbjct 2286724 GGAGAACATCCACTCCGAGACGTACTCGCTGCTGATCGACACTTACATCAAGGAGCCC-T 2286782
Query 42596 CG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654
|| |||| | | || ||||| ||||| || || || || |||||| ||||| |
Sbjct 2286783 CGCAGCGCACCTACCTCTTCAACGCCATCGATACCATCCCGTGCATCCGCCGCAAGGCCG 2286842
Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCC 42713
||||||| ||||| |||||| | | | | | | || || | | || | ||||| |||
Sbjct 2286843 ACTGGGCCCTCAAGTGGATC-ACCGACAAGGAGTCGACCTTTGCCCAGCGCCTGGTCGCC 2286901
Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT---C 42770
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2286902 TTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTCGCCTCCATCTTCTGGCTGCGC 2286961
Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|||| || || ||||| || || |||||||| ||||| || ||| | ||||||
Sbjct 2286962 AAGC--GCGGCCTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAG 2287018
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCT 42888
|| ||||| | ||||||||||| || ||||||||| ||||||| |||| ||||
Sbjct 2287019 GGCCTGCACACCGACTTTGCCTGTCTGCTGTTCTCG---CACCTCA---ACAACCGCCCC 2287072
Query 42889 CG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947
| ||| ||| ||| | |||||||| || || || | || ||||||||||||||
Sbjct 2287073 AGCAAGCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCATTGAGAAGGAGTTCCTG 2287132
Query 42948 ACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006
|| || | |||||| ||| ||| ||||||||||| |||||||||| |||||||
Sbjct 2287133 ACCGAGGCCCTGCCCTGTG-GCCTCCTCGGCATGAACGCCGACCTCATGAAGCAGTACAT 2287191
Query 43007 CCAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064
||| ||||||||||| || || || ||| | || | ||||| | |
Sbjct 2287192 TGAGTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGAAACGAAAAGGTCTACCGCGCC 2287249
Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124
| |||||| ||||||||||||||||||||| | | |||||||||||||| ||||||
Sbjct 2287250 ACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAG 2287309
Query 43125 AAGCGCGTCGCCGACTACCA 43144
|||||||| | |||||||||
Sbjct 2287310 AAGCGCGTGGGCGACTACCA 2287329
>seq8
Length=1110981
Score = 363 bits (402), Expect = 3e-95
Identities = 1141/1747 (65%), Gaps = 49/1747 (3%)
Strand=Plus/Plus
Query 243878 TTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG--GT 243935
|||||||||||| |||||| | |||| | || || || ||||| ||| | ||
Sbjct 323600 TTGAGGGACTGGGACTGGTCAATAAAGGCACCGCGGTCGGCAGCCATC-TGAACAACCGT 323658
Query 243936 CCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTT 243995
| ||| || || || || |||||||||| | | ||||| | | ||| || ||
Sbjct 323659 ACG-CTGCGAAATTTCCCACACCGTCTTGTATAGCGCCTTGATATCCGTGGG-AATGCTG 323716
Query 243996 C-GATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054
| ||| || || | ||||| |||| | | |||| | || | ||||||||| ||||
Sbjct 323717 CTGATATTTTGGATGGAGCCGTTGTCGGCAATGATCCGGTTCTTCATGTTATCAGACCAC 323776
Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTCTCCC 244111
||||| ||| | || | | || ||| ||| ||| || ||||| ||||| ||
Sbjct 323777 AGGCC-AAGGTCGACAAGGTCGCG--CAGCAGCCAAGGGTTGACAACCTGGAACTCGCCG 323833
Query 244112 GACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171
| || || ||||||||||| | |||| || ||||| | || ||| |||| |||
Sbjct 323834 GCAAGAACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCAAAGCACTCGTTGTTACCC 323893
Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231
|| ||||||| ||| || ||||| |||||||| | ||||| ||| ||| | || |||
Sbjct 323894 AGGATCTGCGACGTACTGGCAGTGGGCATGGGTGCAACCAGGAGAGAGTTGCGGACACCG 323953
Query 244232 TGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291
||| || || |||| |||||||||| | | || || | || | |
Sbjct 323954 TGCTGCTTAATCTTCTCCTTGAGGGAAGTCCAGTCCCAAA-GATCGCTGGG-CGTCACAT 324011
Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351
||||||||||||| ||||| | |||| ||| || |||||| || ||
Sbjct 324012 -------CCCACATGTCAAATTGCAGGATGCCCTGCGAGACCGGCGAGCCCTCATAAGTA 324064
Query 244352 GGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGTAGAT 244410
| ||| | || || |||||| | || | | |||| || || |||| ||||||
Sbjct 324065 GAGTATGTGCCCTCAGTCTGGGCAATCTCCATTGAGGCCGTC-AGCGCAGCGTGGTAGAT 324123
Query 244411 GGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCAT 244470
|||||| || ||| |||||||| | || |||| | | || || |||| ||
Sbjct 324124 GGTCTCAAAAATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAAGGCATGCGCAG 324183
Query 244471 CATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTT 244530
|| |||| | || ||||| ||||| || |||| || || || | ||| ||| ||||
Sbjct 324184 AGCCAGGAAGGCATCAGCCAGACCCTGGACACCGACACCAATCGGGCGGTGGCGCATGTT 324243
Query 244531 GGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCG 244590
| | ||| || | || ||||| ||| | || || | ||| ||||||||
Sbjct 324244 GCTGTTGTAGGCCTCCGTGACAGGGTAGTGGTTCACATCAATGATGCGGTTCAGGTTGCG 324303
Query 244591 GGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGC 244650
| | | | ||| || ||| ||||||||||||| ||| |
Sbjct 324304 GACAACGACCTGTGTGACTTCATGAAGCTTTCCAAAGTCGTACTCGC------CCTTGTT 324357
Query 244651 GATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTC 244710
| | || | ||||| | ||||| | |||||||||||| || || |||||
Sbjct 324358 G-TAGTCA-----ACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTC 324411
Query 244711 CTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAG 244770
|| | | ||||| || |||||| ||||| ||||| || ||||| |||||
Sbjct 324412 ATCGGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAG 324471
Query 244771 GTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGT 244830
|| || || ||| |||| ||||||| ||||||||| ||||| ||||| || ||
Sbjct 324472 GTTCTTCTGGTTGCTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGT 324531
Query 244831 CTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGC 244890
|||| |||||| | || | | || ||| || | | ||| |||| | |||| |
Sbjct 324532 CTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGCGGCC 324591
Query 244891 CTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTC 244950
||| || ||||| |||||| || || ||||| ||| || || |
Sbjct 324592 ACGGCCTTCCTTTTCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTAGCAGTCAGC 324651
Query 244951 TAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTG 245010
|||||||||||| |||||||| ||| |||| || || | || || | ||
Sbjct 324652 CAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACACGCTT 324711
Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070
|||||| |||||| |||||| || ||| |||| | ||| | || | ||| |||
Sbjct 324712 CATGAACAGGTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTTCCTT 324771
Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130
||| |||||| | ||| || | || ||||| |||||| |||||||||| |||| |||
Sbjct 324772 TCCATGGTTCTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTA 324831
Query 245131 GACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGT 245189
| ||| | ||| ||||||||||||||||| |||||||| || | | || | ||
Sbjct 324832 TATAGCAAAGGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTG-TTGT 324890
Query 245190 TGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGG 245249
|||||| |||| |||| || || ||||| ||| ||||||||||| |||||||
Sbjct 324891 TGAAGACACGCAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGG 324950
Query 245250 CGCCCTTGCCCC---TGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGA 245306
||| || | | || ||| | | || | || | ||||| || ||||||||
Sbjct 324951 AGCCAGTGGCACGAATGCGGTGGACGTTG---AGACCGATGCCGCCAGCCATCTTGGAGA 325007
Query 245307 TGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGA 245366
| | || || |||||| ||| || |||||||| |||||||| |||||||| ||
Sbjct 325008 TCATAGCACAAGTCTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGA 325067
Query 245367 GCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGG 245426
|||||||| || |||||||||| || ||| | | | |||||| |||||||| |
Sbjct 325068 CTAGAAAGCATGAAGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGGGAGACG 325127
Query 245427 CGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGT 245486
| ||||||||| | |||||| | || ||| |||| ||| | | || | ||||
Sbjct 325128 CATGGGTAAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGAACACGCTCCACATTGT 325187
Query 245487 CGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCG---ATGGGTC 245543
| || || | ||| | ||| | |||||||||| |||| || |
Sbjct 325188 CACCCCAAATGCCGACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 325247
Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGC 245603
| ||| | ||| |||| |||||||||||| || |||||||| ||||||||| ||||
Sbjct 325248 CGTCGAG---CTTAAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGT 325304
Query 245604 CAAAGTC 245610
|||||
Sbjct 325305 TGAAGTC 325311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339058349120
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