Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq8 86.0 5e-12
>seq8
Length=1110981
Score = 86.0 bits (94), Expect = 5e-12
Identities = 106/144 (74%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951
|||| || ||| || | ||| ||||| ||||| || || ||| ||||||||| ||||||
Sbjct 478875 CAAT-GATACCACCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTG 478933
Query 33952 TAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGA 34011
|| || | || || | || || | |||||||| ||||| ||||||||||||||
Sbjct 478934 TAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGG 478993
Query 34012 TCCACCGGCACGCTCTCTTTGTCC 34035
||| || | || ||| ||||||
Sbjct 478994 TCCGGGGGAATGCCCTCCTTGTCC 479017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062341929624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |