Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016-
03-01] 12 sequences; 23,333,049 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 5e-23
>seq4
Length=2525909
Score = 123 bits (136), Expect = 5e-23
Identities = 300/453 (66%), Gaps = 6/453 (1%)
Strand=Plus/Plus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348
||||| |||| || ||||||| | ||| || || || | || || || ||||
Sbjct 2286881 TTTGCCCAGCGCCTGGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTC 2286940
Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408
| ||||||| |||||||| || || | ||||||||||| | || ||||||
Sbjct 2286941 GCCTCCATCTTCTGGCTGCGCAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAG 2287000
Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468
| ||| || ||||||||||| ||| | || | || ||| || | |||
Sbjct 2287001 CTGATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGTCTGCTGTTCTCGCACCTC 2287060
Query 243469 CAGAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTGAAAAC 243525
||||| | || | | | ||| | || |||||||| || || || | |
Sbjct 2287061 ---AACAACCGCCCCAGCAAGCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCATT 2287117
Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585
|| ||||| ||| | ||| || | || || | || | ||||||||| | || |||
Sbjct 2287118 GAGAAGGAGTTCCTGACCGAGGCCCTGCCCTGTGGCCTCCTCGGCATGAACGCCGACCTC 2287177
Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645
||| |||||||| || ||||| ||||||||| | || |||| || || | || ||
Sbjct 2287178 ATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGAAACGAAAAG 2287237
Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705
|| ||| | ||| |||||||||| |||||||||| ||| ||||| || || ||
Sbjct 2287238 GTCTACCGCGCCACCAACCCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGACC 2287297
Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738
||||||||||| ||||| || | || || |||
Sbjct 2287298 AACTTCTTCGAGAAGCGCGTGGGCGACTACCAA 2287330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879830432200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |